Publications by authors named "Benjamin R Gilbert"

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Fundamental behaviors emerge from simulations of a living minimal cell.
Zane R Thornburg, David M Bianchi, Troy A Brier, Benjamin R Gilbert, Emmy E Earnest, Marcelo C R Melo, Nataliya Safronova, James P Sáenz, András T Cook, Kim S Wise

January 2022

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Assembly of Macromolecular Complexes in the Whole-Cell Model of a Minimal Cell.
Enguang Fu, Zane R Thornburg, Troy A Brier, Rong Wei, Bo Yuan, Benjamin R Gilbert

J Phys Chem B· December 2025

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Unraveling the Transcriptional Landscape within a Minimized Bacterium via Comparative Analysis.
Troy A Brier, Jay E Cournoyer, Benjamin R Gilbert, Sage A Glass, Yang-le Gao

bioRxiv· October 2025

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Replicating Chromosomes in Whole-Cell Models of Bacteria.
Benjamin R Gilbert, Zaida Luthey-Schulten

Methods Mol Biol· July 2024

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Dynamics of chromosome organization in a minimal bacterial cell.
Benjamin R Gilbert, Zane R Thornburg, Troy A Brier, Jan A Stevens, Fabian Grünewald

Front Cell Dev Biol· August 2023

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Molecular dynamics simulation of an entire cell.
Jan A Stevens, Fabian Grünewald, P A Marco van Tilburg, Melanie König, Benjamin R Gilbert

Front Chem· January 2023

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Integrating cellular and molecular structures and dynamics into whole-cell models.
Zaida Luthey-Schulten, Zane R Thornburg, Benjamin R Gilbert

Curr Opin Struct Biol· August 2022

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Generating Chromosome Geometries in a Minimal Cell From Cryo-Electron Tomograms and Chromosome Conformation Capture Maps.
Benjamin R Gilbert, Zane R Thornburg, Vinson Lam, Fatema-Zahra M Rashid, John I Glass

Front Mol Biosci· July 2021

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