Publications by authors named "Bingfei Yu"

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Xist ribonucleoproteins promote female sex-biased autoimmunity.
Diana R Dou, Yanding Zhao, Julia A Belk, Yang Zhao, Kerriann M Casey, Derek C Chen, Rui Li, Bingfei Yu, Suhas Srinivasan, Brian T Abe

Cell· February 2024

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A metabolic atlas of mouse aging.
Steven E Pilley, Dominik Awad, Djakim Latumalea, Connie New, Edgar Esparza, Bingfei Yu

Cell Metab· November 2025

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Tumour priming by ultrasound mechanogenetics for CAR T therapy.
Chi Woo Yoon, Chunyang Song, Dung Ngo Minh Nguyen, Xi Yu, Linshan Zhu, Yuxuan Wang, Yunjia Qu, Yushun Zeng, Bingfei Yu

Nat Mater· October 2025

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Massively parallel immunopeptidome by DNA sequencing provides insights into cancer antigen presentation.
Quanming Shi, Elana P Simon, Cansu Cimen Bozkus, Anna Kaminska, Leandra Velazquez, Bingfei Yu

Nat Genet· August 2025

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T-bet deficiency and Hic1 induction override TGF-β-dependency in the formation of CD103 intestine-resident memory CD8 T cells.
Liwen Wang, Shruti Mishra, Kenneth Ka-Ho Fan, Sara Quon, Guo Li, Bingfei Yu, Yuanzheng Qiu, Yue Li, Chaoyu Ma

Cell Rep· June 2024

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A metabolic atlas of mouse aging.
Steven E Pilley, Dominik Awad, Djakim Latumalea, Edgar Esparza, Li Zhang, Bingfei Yu

bioRxiv· May 2024

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Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells.
Connor A Tsuchida, Nadav Brandes, Raymund Bueno, Marena Trinidad, Thomas Mazumder, Bingfei Yu, Byungjin Hwang

Cell· October 2023

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Active maintenance of CD8 T cell naivety through regulation of global genome architecture.
Brendan E Russ, Adele Barugahare, Pushkar Dakle, Kirril Tsyganov, Sara Quon, Bingfei Yu

Cell Rep· October 2023

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DNA architectural protein CTCF facilitates subset-specific chromatin interactions to limit the formation of memory CD8 T cells.
Sara Quon, Bingfei Yu, Brendan E Russ, Kirill Tsyganov, Hongtuyet Nguyen

Immunity· May 2023

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Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells.
Connor A Tsuchida, Nadav Brandes, Raymund Bueno, Marena Trinidad, Thomas Mazumder, Bingfei Yu, Byungjin Hwang

bioRxiv· March 2023

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Active maintenance of CD8 T cell naïvety through regulation of global genome architecture.
Brendan E Russ, Kirril Tsyganov, Sara Quon, Bingfei Yu, Jasmine Li

bioRxiv· February 2023

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Engineered cell entry links receptor biology with single-cell genomics.
Bingfei Yu, Quanming Shi, Julia A Belk, Kathryn E Yost, Kevin R Parker

Cell· December 2022

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Bromodomain protein BRD4 directs and sustains CD8 T cell differentiation during infection.
J Justin Milner, Clara Toma, Sara Quon, Kyla Omilusik, Nicole E Scharping, Bingfei Yu

J Exp Med· August 2021

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A microRNA expression and regulatory element activity atlas of the mouse immune system.
Samuel A Rose, Aleksandra Wroblewska, Maxime Dhainaut, Hideyuki Yoshida, Jonathan M Shaffer, Bingfei Yu

Nat Immunol· July 2021

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B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells.
Bingfei Yu, Yanyan Qi, Rui Li, Quanming Shi, Ansuman T Satpathy

Cell· April 2021

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B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells.
Bingfei Yu, Yanyan Qi, Rui Li, Quanming Shi, Ansuman Satpathy

bioRxiv· January 2021

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Heterogeneity and clonal relationships of adaptive immune cells in ulcerative colitis revealed by single-cell analyses.
Brigid S Boland, Zhaoren He, Matthew S Tsai, Jocelyn G Olvera, Kyla D Omilusik, Bingfei Yu

Sci Immunol· August 2020

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Bcl-6 is the nexus transcription factor of T follicular helper cells via repressor-of-repressor circuits.
Jinyong Choi, Huitian Diao, Caterina E Faliti, Jacquelyn Truong, Meghan Rossi, Bingfei Yu

Nat Immunol· July 2020

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T-bet Transcription Factor Promotes Antibody-Secreting Cell Differentiation by Limiting the Inflammatory Effects of IFN-γ on B Cells.
Sara L Stone, Jessica N Peel, Christopher D Scharer, Christopher A Risley, Danielle A Chisolm, Bingfei Yu

Immunity· May 2019

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The cis-Regulatory Atlas of the Mouse Immune System.
Hideyuki Yoshida, Caleb A Lareau, Ricardo N Ramirez, Samuel A Rose, Barbara Maier, Bingfei Yu

Cell· February 2019

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The Transcription Factor Runx3 Establishes Chromatin Accessibility of cis-Regulatory Landscapes that Drive Memory Cytotoxic T Lymphocyte Formation.
Dapeng Wang, Huitian Diao, Adam J Getzler, Walter Rogal, Megan A Frederick, Bingfei Yu

Immunity· April 2018

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Sustained Id2 regulation of E proteins is required for terminal differentiation of effector CD8 T cells.
Kyla D Omilusik, Marija S Nadjsombati, Laura A Shaw, Bingfei Yu, J Justin Milner

J Exp Med· March 2018

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Erratum: Runx3 programs CD8 T cell residency in non-lymphoid tissues and tumours.
J Justin Milner, Clara Toma, Bingfei Yu, Kai Zhang, Kyla Omilusik

Nature· February 2018

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Runx3 programs CD8 T cell residency in non-lymphoid tissues and tumours.
J Justin Milner, Clara Toma, Bingfei Yu, Kai Zhang, Kyla Omilusik

Nature· December 2017

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Erratum: Epigenetic landscapes reveal transcription factors that regulate CD8 T cell differentiation.
Bingfei Yu, Kai Zhang, J Justin Milner, Clara Toma, Runqiang Chen

Nat Immunol· May 2017

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