Publications by authors named "Catherine D Carrillo"

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Exploiting a targeted resistome sequencing approach in assessing antimicrobial resistance in retail foods.
Julie A Shay, Laura S E Haniford, Ashley Cooper, Catherine D Carrillo, Burton W Blais, Calvin Ho-Fung Lau

March 2023

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Survival of antimicrobial resistant Heidelberg inoculated into microcosms of fresh pine wood shavings for broiler litter.
Adelumola Oladeinde, Kimberly Cook, Attiq Rehman, Catherine D Carrillo, Reed Woyda

Can J Microbiol· January 2025

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Crossing the streams: improving data quality and integration across the One Health genomics continuum with data standards and implementation strategies.
Emma J Griffiths, Emil Jurga, Gabriel Wajnberg, Julie A Shay, Rhiannon Cameron, Catherine D Carrillo

Can J Microbiol· January 2025

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Development and evaluation of a sensitive approach for detection and recovery of third-generation cephalosporin- and carbapenem-resistant Enterobacterales from ready-to-eat frozen stone fruit.
Adeeb Nasta, Ashley L Cooper, Irelynd V Tackabury, Chloe Anastasiadis, Calvin Ho-Fung Lau, Catherine D Carrillo

Can J Microbiol· January 2025

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Requirements and considerations for effective implementation of integrated One Health antimicrobial resistance research.
Dominic Poulin-Laprade, Jordyn Broadbent, Damien Biot-Pelletier, Susanne Kraemer, Emma J Griffiths, Catherine D Carrillo

Can J Microbiol· January 2025

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Bacterial microbiota associated with raw plant-based meat analogue products and their influences on selective enrichment for O157:H7.
Sabrina Capitani, Liam P Brown, Catherine D Carrillo, Calvin Ho-Fung Lau

Curr Res Food Sci· December 2024

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Strain-specific Recovery of S. sonnei from Artificially Contaminated Baby Carrots: Enhancing Food-safety Investigations with a Customized Shigella Detection Method Based on Genomically predicted Antibiotic Resistance Traits.
Lang Yao, Ashley Cooper, Calvin Ho-Fung Lau, Alex Wong, Burton W Blais, Catherine D Carrillo

J Food Prot· July 2024

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Overcoming Microbial Inhibition of S. Sonnei Through the Exploitation of Genomically Predicted Antibiotic Resistance Profiles for the Development of Food Enrichment Media.
Lang Yao, Ashley L Cooper, Alex Gill, Adam Koziol, Alex Wong, Catherine D Carrillo

J Food Prot· July 2024

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Characterization of MLST-99 Typhimurium and the monophasic variant I:4,[5],12:i:- isolated from Canadian Atlantic coast shellfish.
Lisa M Hodges, Ashley Cooper, Adam Koziol, Catherine D Carrillo

Microbiology (Reading)· May 2024

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Analysis of Antimicrobial Resistance in Bacterial Pathogens Recovered from Food and Human Sources: Insights from 639,087 Bacterial Whole-Genome Sequences in the NCBI Pathogen Detection Database.
Ashley L Cooper, Alex Wong, Sandeep Tamber, Burton W Blais, Catherine D Carrillo

Microorganisms· March 2024

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Modeling the limits of detection for antimicrobial resistance genes in agri-food samples: a comparative analysis of bioinformatics tools.
Ashley L Cooper, Andrew Low, Alex Wong, Sandeep Tamber, Burton W Blais, Catherine D Carrillo

BMC Microbiol· January 2024

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Virulence potential of antimicrobial-resistant extraintestinal pathogenic Escherichia coli from retail poultry meat in a Caenorhabditis elegans model.
Chongwu Yang, Moussa S Diarra, Muhammad Attiq Rehman, Linyan Li, Hai Yu, Catherine D Carrillo

J Food Prot· January 2023

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Microbial Antagonism in Food-Enrichment Culture: Inhibition of Shiga Toxin-Producing and Species.
Tanis C McMahon, Cesar Bin Kingombe, Amit Mathews, Karine Seyer, Alex Wong, Catherine D Carrillo

Front Microbiol· June 2022

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Virulence Genotype and Phenotype of Multiple Antimicrobial-Resistant Escherichia coli Isolates from Broilers Assessed from a "One-Health" Perspective.
Muhammad Attiq Rehman, Heidi Rempel, Catherine D Carrillo, Kim Ziebell, Kevin Allen

J Food Prot· February 2022

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Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in and .
Lisa M Hodges, Eduardo N Taboada, Adam Koziol, Steven Mutschall, Burton W Blais, Catherine D Carrillo

Front Microbiol· November 2021

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Antimicrobial Resistance Phenotypes and Genotypes of Escherichia coli Isolates from Broiler Chickens Fed Encapsulated Cinnamaldehyde and Citral.
Chongwu Yang, Muhammad Attiq Rehman, Xianhua Yin, Catherine D Carrillo, Q I Wang

J Food Prot· August 2021

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Resistance determinants and their genetic context in enterobacteria from a longitudinal study of pigs reared under various husbandry conditions.
Dominic Poulin-Laprade, Jean-Simon Brouard, Nathalie Gagnon, Annie Turcotte, Alexandra Langlois, Catherine D Carrillo

Appl Environ Microbiol· April 2021

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Genomic Markers for Quaternary Ammonium Compound Resistance as a Persistence Indicator for Listeria monocytogenes Contamination in Food Manufacturing Environments.
Ashley L Cooper, Catherine D Carrillo, MylÈne DeschÊnes, Burton W Blais

J Food Prot· March 2021

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A comparison of fourteen fully characterized mammalian-associated isolates suggests that loss of defense mechanisms contribute to high genomic plasticity and subspecies evolution.
Susan A Nadin-Davis, John Chmara, Catherine D Carrillo, Kingsley Amoako, Noriko Goji

PeerJ· February 2021

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Systematic Evaluation of Whole Genome Sequence-Based Predictions of Serotype and Antimicrobial Resistance.
Ashley L Cooper, Andrew J Low, Adam G Koziol, Matthew C Thomas, Daniel Leclair, Catherine D Carrillo

Front Microbiol· April 2020

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"These Aren't the Strains You're Looking for": Recovery Bias of Common Subtypes in Mixed Cultures.
Benjamin M Hetman, Steven K Mutschall, Catherine D Carrillo, James E Thomas, Victor P J Gannon

Front Microbiol· April 2020

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A strain comparison of Campylobacter isolated from retail poultry and human clinical cases in Atlantic Canada.
Lisa M Hodges, Catherine D Carrillo, Jacqueline P Upham, Antonela Borza, Mikaela Eisebraun

PLoS One· January 2020

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ConFindr: rapid detection of intraspecies and cross-species contamination in bacterial whole-genome sequence data.
Andrew J Low, Adam G Koziol, Paul A Manninger, Burton Blais, Catherine D Carrillo

PeerJ· May 2019

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Genomically Informed Strain-Specific Recovery of Shiga Toxin-Producing Escherichia coli during Foodborne Illness Outbreak Investigations.
Burton W Blais, Kyle Tapp, Martine Dixon, Catherine D Carrillo

J Food Prot· January 2019

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Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.
Ben Pascoe, Guillaume Méric, Koji Yahara, Helen Wimalarathna, Susan Murray, Catherine D Carrillo

Mol Ecol· September 2017

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