Publications by authors named "Cesar A Ramirez-Sarmiento"

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Low Carbon Footprint Recycling of Post-Consumer PET Plastic with a Metagenomic Polyester Hydrolase.
Christian Sonnendecker, Juliane Oeser, P Konstantin Richter, Patrick Hille, Ziyue Zhao, Cornelius Fischer, Holger Lippold, Paula Blázquez-Sánchez, Felipe Engelberger, César A Ramírez-Sarmiento

ChemSusChem· May 2022

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Structural and Biophysical Basis for PFAS Binding by Human Sterol Carrier Protein-2.
Aaron S Birchfield, Rachel L Signorelli, Kyla T Cang, César A Ramírez-Sarmiento, Brian Fuglestad

bioRxiv· October 2025

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Computational and experimental assessment of key interdomain residues controlling the fold-switch of RfaH.
Cyndi Tabilo-Agurto, Javiera Reyes, Irina Artsimovitch, César A Ramírez-Sarmiento

Protein Sci· July 2025

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A contact-based analysis of local energetic frustration dynamics identifies key residues enabling RfaH fold-switch.
Jorge González-Higueras, María Inés Freiberger, Pablo Galaz-Davison, R Gonzalo Parra, César A Ramírez-Sarmiento

Protein Sci· October 2024

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Dissecting the structural and functional consequences of the evolutionary proline-glycine deletion in the wing 1 region of the forkhead domain of human FoxP1.
Stephanie Tamarín, Pablo Galaz-Davison, César A Ramírez-Sarmiento, Jorge Babul, Exequiel Medina

FEBS Lett· September 2024

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Metamorphic proteins and how to find them.
Lauren L Porter, Irina Artsimovitch, César A Ramírez-Sarmiento

Curr Opin Struct Biol· June 2024

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The Light Chain Allosterically Enhances the Protease Activity of Murine Urokinase-Type Plasminogen Activator.
Constanza Torres-Paris, Harriet J Song, Felipe Engelberger, César A Ramírez-Sarmiento, Elizabeth A Komives

Biochemistry· June 2024

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Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Philipp K Zuber, Nelly Said, Tarek Hilal, Bing Wang, Bernhard Loll

Nat Commun· April 2024

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DNA controls the dimerization of the human FoxP1 forkhead domain.
Narendar Kolimi, Jake Ballard, Thomas Peulen, Rajen Goutam, Francis X Duffy

Cell Rep Phys Sci· March 2024

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An Open One-Step RT-qPCR for SARS-CoV-2 detection.
Ariel Cerda, Maira Rivera, Grace Armijo, Catalina Ibarra-Henriquez, Javiera Reyes

PLoS One· January 2024

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Local energetic frustration conservation in protein families and superfamilies.
Maria I Freiberger, Victoria Ruiz-Serra, Camila Pontes, Miguel Romero-Durana, Pablo Galaz-Davison

Nat Commun· December 2023

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Engineering the catalytic activity of an Antarctic PET-degrading enzyme by loop exchange.
Paula Blázquez-Sánchez, Jhon A Vargas, Adriano A Furtado, Aransa Griñen, Diego A Leonardo

Protein Sci· September 2023

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Exploring the structural acrobatics of fold-switching proteins using simplified structure-based models.
Ignacio Retamal-Farfán, Jorge González-Higueras, Pablo Galaz-Davison, Maira Rivera, César A Ramírez-Sarmiento

Biophys Rev· August 2023

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Unraveling the folding and dimerization properties of the human FoxP subfamily of transcription factors.
Pablo Villalobos, Alonso I Carvajal, Víctor Castro-Fernández, Jorge Babul, César A Ramírez-Sarmiento

FEBS Lett· July 2023

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Effect of temperature and nucleotide on the binding of BiP chaperone to a protein substrate.
Maira Rivera, Francesca Burgos-Bravo, Felipe Engelberger, Roi Asor, Miguel I A Lagos-Espinoza

Protein Sci· July 2023

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DNA facilitates heterodimerization between human transcription factors FoxP1 and FoxP2 by increasing their conformational flexibility.
Ricardo Coñuecar, Isabel Asela, Maira Rivera, Pablo Galaz-Davison, Jorge González-Higueras

iScience· July 2023

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Domain tethering impacts dimerization and DNA-mediated allostery in the human transcription factor FoxP1.
Perla Cruz, Nicolás Paredes, Isabel Asela, Narendar Kolimi, José Alejandro Molina

J Chem Phys· May 2023

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Conformational Selection of a Tryptophan Side Chain Drives the Generalized Increase in Activity of PET Hydrolases through a Ser/Ile Double Mutation.
Alessandro Crnjar, Aransa Griñen, Shina C L Kamerlin, César A Ramírez-Sarmiento

ACS Org Inorg Au· April 2023

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Discovery of New Phenylacetone Monooxygenase Variants for the Development of Substituted Indigoids through Biocatalysis.
Nicolás Núñez-Navarro, Javier Salazar Muñoz, Francisco Castillo, César A Ramírez-Sarmiento, Ignacio Poblete-Castro

Int J Mol Sci· October 2022

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Metamorphic proteins under a computational microscope: Lessons from a fold-switching RfaH protein.
Irina Artsimovitch, César A Ramírez-Sarmiento

Comput Struct Biotechnol J· October 2022

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Coevolution-derived native and non-native contacts determine the emergence of a novel fold in a universally conserved family of transcription factors.
Pablo Galaz-Davison, Diego U Ferreiro, César A Ramírez-Sarmiento

Protein Sci· June 2022

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Allosteric couplings upon binding of RfaH to transcription elongation complexes.
José Alejandro Molina, Pablo Galaz-Davison, Elizabeth A Komives, Irina Artsimovitch, César A Ramírez-Sarmiento

Nucleic Acids Res· June 2022

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Dimer dissociation is a key energetic event in the fold-switch pathway of KaiB.
Maira Rivera, Pablo Galaz-Davison, Ignacio Retamal-Farfán, Elizabeth A Komives, César A Ramírez-Sarmiento

Biophys J· March 2022

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Palmitic and Stearic Acids Inhibit Chaperone-Mediated Autophagy (CMA) in POMC-like Neurons In Vitro.
Rodrigo Espinosa, Karla Gutiérrez, Javiera Rios, Fernando Ormeño, Liliana Yantén

Cells· March 2022

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Bio-click chemistry: a bridge between biocatalysis and click chemistry.
Diego F Rodríguez, Yanina Moglie, César A Ramírez-Sarmiento, Sachin Kumar Singh, Kamal Dua

RSC Adv· January 2022

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Homebrew reagents for low-cost RT-LAMP.
Tamara Matute, Isaac Nuñez, Maira Rivera, Javiera Reyes, Paula Blázquez-Sánchez

J Biomol Tech· September 2021

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