Publications by authors named "Daniel Pelt"

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Enhancing synchrotron radiation micro-CT images using deep learning: an application of Noise2Inverse on bone imaging.
Yoshihiro Obata, Dilworth Y Parkinson, Daniël M Pelt, Claire Acevedo

J Synchrotron Radiat· May 2025

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Multi-stage deep learning artifact reduction for parallel-beam computed tomography.
Jiayang Shi, Daniël M Pelt, K Joost Batenburg

J Synchrotron Radiat· March 2025

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Automated Cone Photoreceptor Detection in Adaptive Optics Flood Illumination Ophthalmoscopy.
Sander Wooning, Pam A T Heutinck, Kubra Liman, Sem Hennekam, Manon van Haute, Daniel M Pelt

Ophthalmol Sci· December 2024

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Reducing Manual Annotation Costs for Cell Segmentation by Upgrading Low-Quality Annotations.
Serban Vădineanu, Daniël M Pelt, Oleh Dzyubachyk, Kees Joost Batenburg

J Imaging· July 2024

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How auto-differentiation can improve CT workflows: classical algorithms in a modern framework.
Richard Schoonhoven, Alexander Skorikov, Willem Jan Palenstijn, Daniël M Pelt, Allard A Hendriksen

Opt Express· March 2024

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Towards fully automated inner ear analysis with deep-learning-based joint segmentation and landmark detection framework.
Jannik Stebani, Martin Blaimer, Simon Zabler, Tilmann Neun, Daniël M Pelt

Sci Rep· November 2023

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High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers.
Ruochen Ouyang, Ana Rita Costa, C Keith Cassidy, Aleksandra Otwinowska, Vera C J Williams, Daniël M Pelt

Nat Commun· November 2022

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Cryo-electron tomography with mixed-scale dense neural networks reveals key steps in deployment of invasion machinery.
Li-Av Segev-Zarko, Peter D Dahlberg, Stella Y Sun, Daniël M Pelt, Chi Yong Kim

PNAS Nexus· September 2022

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Cervical cell lift: A novel triage method for the spatial mapping and grading of precancerous cervical lesions.
Aslam Shiraz, Nagayasu Egawa, Daniël M Pelt, Robin Crawford, Adeline K Nicholas

EBioMedicine· August 2022

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Foam-like phantoms for comparing tomography algorithms.
Daniël M Pelt, Allard A Hendriksen, Kees Joost Batenburg

J Synchrotron Radiat· January 2022

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Cycloidal CT with CNN-based sinogram completion and in-scan generation of training data.
Daniël M Pelt, Oriol Roche I Morgó, Charlotte Maughan Jones, Alessandro Olivo, Charlotte K Hagen

Sci Rep· January 2022

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Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python.
Allard A Hendriksen, Dirk Schut, Willem Jan Palenstijn, Nicola Viganó, Jisoo Kim, Daniël M Pelt

Opt Express· November 2021

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Improving reproducibility in synchrotron tomography using implementation-adapted filters.
Poulami Somanya Ganguly, Daniël M Pelt, Doga Gürsoy, Francesco de Carlo, K Joost Batenburg

J Synchrotron Radiat· September 2021

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Deep learning-based denoising for improved dose efficiency in EDX tomography of nanoparticles.
Alexander Skorikov, Wouter Heyvaert, Wiebke Albecht, Daniël M Pelt, Sara Bals

Nanoscale· July 2021

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Deep denoising for multi-dimensional synchrotron X-ray tomography without high-quality reference data.
Allard A Hendriksen, Minna Bührer, Laura Leone, Marco Merlini, Nicola Vigano, Daniël M Pelt

Sci Rep· June 2021

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Tackling the challenges of bioimage analysis.
Daniël M Pelt

Elife· December 2020

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Task-Driven Learned Hyperspectral Data Reduction Using End-to-End Supervised Deep Learning.
Mathé T Zeegers, Daniël M Pelt, Tristan van Leeuwen, Robert van Liere, Kees Joost Batenburg

J Imaging· December 2020

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A Computationally Efficient Reconstruction Algorithm for Circular Cone-Beam Computed Tomography Using Shallow Neural Networks.
Marinus J Lagerwerf, Daniël M Pelt, Willem Jan Palenstijn, Kees Joost Batenburg

J Imaging· December 2020

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Pushing the temporal resolution in absorption and Zernike phase contrast nanotomography: enabling fast in situ experiments.
Silja Flenner, Malte Storm, Adam Kubec, Elena Longo, Florian Döring, Daniël M Pelt

J Synchrotron Radiat· September 2020

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Real-time reconstruction and visualisation towards dynamic feedback control during time-resolved tomography experiments at TOMCAT.
Jan-Willem Buurlage, Federica Marone, Daniël M Pelt, Willem Jan Palenstijn, Marco Stampanoni

Sci Rep· December 2019

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Segmentation of dental cone-beam CT scans affected by metal artifacts using a mixed-scale dense convolutional neural network.
Jordi Minnema, Maureen van Eijnatten, Allard A Hendriksen, Niels Liberton, Daniël M Pelt

Med Phys· November 2019

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A mixed-scale dense convolutional neural network for image analysis.
Daniël M Pelt, James A Sethian

Proc Natl Acad Sci U S A· January 2018

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Insight into 3D micro-CT data: exploring segmentation algorithms through performance metrics.
Talita Perciano, Daniela Ushizima, Harinarayan Krishnan, Dilworth Parkinson, Natalie Larson, Daniël M Pelt

J Synchrotron Radiat· September 2017

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Improved tomographic reconstruction of large-scale real-world data by filter optimization.
Daniël M Pelt, Vincent De Andrade

Adv Struct Chem Imaging· December 2016

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Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data.
Daniël M Pelt, Dogˇa Gürsoy, Willem Jan Palenstijn, Jan Sijbers, Francesco De Carlo

J Synchrotron Radiat· May 2016

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