Publications by authors named "Edward G Ruby"

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A lasting symbiosis: how Vibrio fischeri finds a squid partner and persists within its natural host.
Karen L Visick, Eric V Stabb, Edward G Ruby

Nat Rev Microbiol· October 2021

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Strain matters: host responses reflect symbiont origin in the squid-vibrio symbiosis.
Vera Beilinson, Grischa Y Chen, Alexis C Hargadon, Edward G Ruby, Margaret J McFall-Ngai

mSystems· December 2025

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Mutant alleles enable a D-glutamate auxotroph to grow with lower requirements for exogenous D-glutamate.
Macey Coppinger, Richard F Helm, Liu Yang, Edward G Ruby, David L Popham

Microbiol Spectr· October 2025

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Application of amplicon sequencing to characterize microbial communities associated with juvenile and adult squid.
Steph Smith, Clotilde Bongrand, Susannah Lawhorn, Edward G Ruby, Alecia N Septer

ISME Commun· January 2025

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An acidic microenvironment produced by the V-type ATPase of Euprymna scolopes promotes specificity during Vibrio fischeri recruitment.
Alexis C Hargadon, Joani W Viliunas, Sabrina Koehler, Angus B Thies, Grischa Y Chen, Edward G Ruby

Commun Biol· December 2024

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Application of amplicon sequencing to characterize microbial communities associated with juvenile and adult squid.
Steph Smith, Clotilde Bongrand, Susannah Lawhorn, Edward G Ruby, Alecia N Septer

bioRxiv· September 2024

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Maturation state of colonization sites promotes symbiotic resiliency in the Euprymna scolopes-Vibrio fischeri partnership.
Tara Essock-Burns, Susannah Lawhorn, Leo Wu, Sawyer McClosky, Silvia Moriano-Gutierrez, Edward G Ruby

Microbiome· March 2023

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Ciliated epithelia are key elements in the recruitment of bacterial partners in the squid-vibrio symbiosis.
Katrina A Gundlach, Janna Nawroth, Eva Kanso, Farzana Nasrin, Edward G Ruby

Front Cell Dev Biol· October 2022

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Transitioning to confined spaces impacts bacterial swimming and escape response.
Jonathan B Lynch, Nicholas James, Margaret McFall-Ngai, Edward G Ruby, Sangwoo Shin

Biophys J· July 2022

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Evidence of Genomic Diversification in a Natural Symbiotic Population Within Its Host.
Clotilde Bongrand, Eric Koch, Daniel Mende, Anna Romano, Susannah Lawhorn, Edward G Ruby

Front Microbiol· March 2022

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Independent host- and bacterium-based determinants protect a model symbiosis from phage predation.
Jonathan B Lynch, Brittany D Bennett, Bryan D Merrill, Edward G Ruby, Andrew J Hryckowian

Cell Rep· February 2022

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MicroRNA-Mediated Regulation of Initial Host Responses in a Symbiotic Organ.
Silvia Moriano-Gutierrez, Edward G Ruby, Margaret J McFall-Ngai

mSystems· May 2021

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Modeled microgravity alters lipopolysaccharide and outer membrane vesicle production of the beneficial symbiont Vibrio fischeri.
Madeline M Vroom, Yaneli Rodriguez-Ocasio, Jonathan B Lynch, Edward G Ruby, Jamie S Foster

NPJ Microgravity· March 2021

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The cytokine MIF controls daily rhythms of symbiont nutrition in an animal-bacterial association.
Eric J Koch, Clotilde Bongrand, Brittany D Bennett, Susannah Lawhorn, Silvia Moriano-Gutierrez, Edward G Ruby

Proc Natl Acad Sci U S A· November 2020

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The noncoding small RNA SsrA is released by Vibrio fischeri and modulates critical host responses.
Silvia Moriano-Gutierrez, Clotilde Bongrand, Tara Essock-Burns, Leo Wu, Margaret J McFall-Ngai, Edward G Ruby

PLoS Biol· November 2020

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HbtR, a Heterofunctional Homolog of the Virulence Regulator TcpP, Facilitates the Transition between Symbiotic and Planktonic Lifestyles in Vibrio fischeri.
Brittany D Bennett, Tara Essock-Burns, Edward G Ruby

mBio· September 2020

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The impact of persistent colonization by on the metabolome of the host squid .
Eric J Koch, Silvia Moriano-Gutierrez, Edward G Ruby, Margaret McFall-Ngai, Manuel Liebeke

J Exp Biol· August 2020

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Insights into flagellar function and mechanism from the squid-vibrio symbiosis.
Marie-Stephanie Aschtgen, Caitlin A Brennan, Kiel Nikolakakis, Stephanie Cohen, Margaret McFall-Ngai, Edward G Ruby

NPJ Biofilms Microbiomes· June 2020

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Interactions of Symbiotic Partners Drive the Development of a Complex Biogeography in the Squid-Vibrio Symbiosis.
Tara Essock-Burns, Clotilde Bongrand, William E Goldman, Edward G Ruby, Margaret J McFall-Ngai

mBio· May 2020

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Tracking the cargo of extracellular symbionts into host tissues with correlated electron microscopy and nanoscale secondary ion mass spectrometry imaging.
Stephanie K Cohen, Marie-Stéphanie Aschtgen, Jonathan B Lynch, Sabrina Koehler, Fangmin Chen, Edward G Ruby

Cell Microbiol· April 2020

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Using Colonization Assays and Comparative Genomics To Discover Symbiosis Behaviors and Factors in Vibrio fischeri.
Clotilde Bongrand, Silvia Moriano-Gutierrez, Philip Arevalo, Margaret McFall-Ngai, Karen L Visick, Edward G Ruby

mBio· March 2020

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Ambient pH Alters the Protein Content of Outer Membrane Vesicles, Driving Host Development in a Beneficial Symbiosis.
Jonathan B Lynch, Julia A Schwartzman, Brittany D Bennett, Sarah J McAnulty, Mirjam Knop, Edward G Ruby

J Bacteriol· October 2019

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Acidic pH promotes lipopolysaccharide modification and alters colonization in a bacteria-animal mutualism.
Julia A Schwartzman, Jonathan B Lynch, Stephany Flores Ramos, Lawrence Zhou, Michael A Apicella, Edward G Ruby

Mol Microbiol· October 2019

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The impact of Vibrio fischeri strain variation on host colonization.
Clotilde Bongrand, Edward G Ruby

Curr Opin Microbiol· August 2019

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Critical symbiont signals drive both local and systemic changes in diel and developmental host gene expression.
Silvia Moriano-Gutierrez, Eric J Koch, Hailey Bussan, Kymberleigh Romano, Mahdi Belcaid, Edward G Ruby

Proc Natl Acad Sci U S A· April 2019

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