Publications by authors named "Francesca De Filippis"

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Mediterranean diet intervention in overweight and obese subjects lowers plasma cholesterol and causes changes in the gut microbiome and metabolome independently of energy intake.
Victoria Meslier, Manolo Laiola, Henrik Munch Roager, Francesca De Filippis, Hugo Roume, Benoit Quinquis, Rosalba Giacco, Ilario Mennella, Rosalia Ferracane, Nicolas Pons

July 2020

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Microbial ecology dynamics during rye and wheat sourdough preparation.
Danilo Ercolini, Erica Pontonio, Francesca De Filippis, Fabio Minervini, Antonietta La Storia, Marco Gobbetti, Raffaella Di Cagno

December 2013

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Comparative analysis of antibiotic-administered vs. antibiotic-free farming in meat production: Implications for health, environment, and antibiotic resistance.
Asim Ur Rahman, Vincenzo Valentino, Giuseppina Sequino, Danilo Ercolini, Francesca De Filippis

Food Microbiol· January 2026

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Assessment of source and storage conditions on bacterial composition of mineral packaged water using amplicon sequencing.
Beatriz S Silva, Francesca De Filippis, Manolo Laiola, Marianna M Furtado, Dionisio P Amorim-Neto

Food Res Int· November 2025

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Validation of the fermented food frequency questionnaire to assess consumption across four European regions: a study within the promoting innovation of fermented foods cost action.
Emmanuella Magriplis, Theodoros Smiliotopoulos, Niki Myrintzou, Kathryn Jane Burton-Pimentel, Signe Adamberg, Francesca De Filippis

Front Nutr· November 2025

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Can Early Nutrition Be Responsible for Future Gut Microbiota Changes and Different Health Outcomes?
Raffaella de Franchis, Luigi Bozza, Paolo Cortese, Lorenzo D'Antonio, Antonio D'Avino, Francesca De Filippis

Nutrients· November 2025

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Postbiotics versus probiotics: Possible new allies for human health.
Chiara Maria Calvanese, Francesco Villani, Danilo Ercolini, Francesca De Filippis

Food Res Int· October 2025

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First Evidence of Metabolically Active Intracellular Bacteria in .
Annabella Tramice, Gianni Liti, Annalaura Iodice, Gennaro Roberto Abbamondi, Federica Carlea, Francesca De Filippis

J Agric Food Chem· October 2025

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Probiotic pasta consumption improves lipid metabolism and reduces gut permeability in overweight and obese adults: a randomized controlled trial.
Silvia Tagliamonte, Roberta Barone Lumaga, Francesca De Filippis, Vincenzo Valentino, Maria Aponte

Curr Res Food Sci· October 2025

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Thymic stromal lymphopoietin in systemic sclerosis interstitial lung disease: a pilot study.
Chiara Pellicano, Giuseppina Cusano, Amalia Colalillo, Francesca Villani, Valeria Carnazzo, Francesca De Filippis

Clin Exp Rheumatol· August 2025

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The food-associated resistome is shaped by processing and production environments.
Narciso M Quijada, José F Cobo-Díaz, Vincenzo Valentino, Coral Barcenilla, Francesca De Filippis

Nat Microbiol· August 2025

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Microbiome profiling of Grana Padano and Parmigiano Reggiano cheeses reveals cheese-specific biomarkers, psychobiotic potential, and bioprotective activities.
Vincenzo Valentino, Raffaele Magliulo, Andrea Balivo, Alicja Monika Krysmann, Chiara Maria Calvanese, Francesca De Filippis

NPJ Biofilms Microbiomes· August 2025

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Environmental microbiome mapping in poultry processing chain and assessment of microbial dynamics in response to different storage conditions.
Giuseppina Sequino, José F Cobo-Diaz, Vincenzo Valentino, Chrysoula Tassou, Stefania Volpe, Francesca De Filippis

Food Microbiol· June 2025

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Genome sequence of potential psychobiotic A20T1A using long-read ONT technology.
Irene Franciosa, Davide Buzzanca, Luca Cocolin, Francesca De Filippis, Ilario Ferrocino

Microbiol Resour Announc· January 2025

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Bifidobacteriaceae diversity in the human microbiome from a large-scale genome-wide analysis.
Edoardo Pasolli, Italia Elisa Mauriello, Michele Avagliano, Sara Cavaliere, Francesca De Filippis

Cell Rep· December 2024

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Genomic features and prevalence of Ruminococcus species in humans are associated with age, lifestyle, and disease.
Vincenzo Valentino, Francesca De Filippis, Roberto Marotta, Edoardo Pasolli, Danilo Ercolini

Cell Rep· December 2024

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Gaba-producing lactobacilli boost cognitive reactivity to negative mood without improving cognitive performance: A human Double-Blind Placebo-Controlled Cross-Over study.
Melania Casertano, Matthijs Dekker, Vincenzo Valentino, Francesca De Filippis, Vincenzo Fogliano

Brain Behav Immun· November 2024

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Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome.
Niccolò Carlino, Aitor Blanco-Míguez, Michal Punčochář, Claudia Mengoni, Federica Pinto, Francesca De Filippis

Cell· October 2024

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In-depth characterization of food and environmental microbiomes across different meat processing plants.
Coral Barcenilla, José F Cobo-Díaz, Alba Puente, Vincenzo Valentino, Francesca De Filippis

Microbiome· October 2024

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Microbiome signatures associated with flavor development differentiate Protected Designation of origin water Buffalo Mozzarella cheese from different production areas.
Raffaele Magliulo, Vincenzo Valentino, Andrea Balivo, Alessia Esposito, Alessandro Genovese, Francesca De Filippis

Food Res Int· September 2024

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Microbiome mapping in dairy industry reveals new species and genes for probiotic and bioprotective activities.
Francesca De Filippis, Vincenzo Valentino, Min Yap, Raul Cabrera-Rubio, Coral Barcenilla

NPJ Biofilms Microbiomes· August 2024

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Microbiome mapping in beef processing reveals safety-relevant variations in microbial diversity and genomic features.
Giuseppina Sequino, José F Cobo-Diaz, Vincenzo Valentino, Chrysoula Tassou, Stefania Volpe, Francesca De Filippis

Food Res Int· June 2024

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Explainable artificial intelligence and microbiome data for food geographical origin: the Mozzarella di Bufala Campana PDO Case of Study.
Michele Magarelli, Pierfrancesco Novielli, Francesca De Filippis, Raffaele Magliulo, Pierpaolo Di Bitonto

Front Microbiol· June 2024

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Improved sampling and DNA extraction procedures for microbiome analysis in food-processing environments.
Coral Barcenilla, José F Cobo-Díaz, Francesca De Filippis, Vincenzo Valentino, Raul Cabrera Rubio

Nat Protoc· May 2024

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Exposure to environmental pollutants selects for xenobiotic-degrading functions in the human gut microbiome.
Francesca De Filippis, Vincenzo Valentino, Giuseppina Sequino, Giorgia Borriello, Marita Georgia Riccardi

Nat Commun· May 2024

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Negative plant-soil feedback in Arabidopsis thaliana: Disentangling the effects of soil chemistry, microbiome, and extracellular self-DNA.
Mohamed Idbella, Giuliano Bonanomi, Francesca De Filippis, Alessandro Foscari, Maurizio Zotti

Microbiol Res· April 2024

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Fermented foods, their microbiome and its potential in boosting human health.
Vincenzo Valentino, Raffaele Magliulo, Dominic Farsi, Paul D Cotter, Orla O'Sullivan, Francesca De Filippis

Microb Biotechnol· February 2024

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