Publications by authors named "Haochen Zhao"

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DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing.
Peng Ni, Fan Nie, Zeyu Zhong, Jinrui Xu, Neng Huang, Jun Zhang, Haochen Zhao, You Zou, Yuanfeng Huang, Jinchen Li

Nat Commun· July 2023

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Enhancing the Feature Representation of Protein Sequence Descriptors in Protein-Protein Interaction Prediction.
Hoai-Nhan Tran, Nguyen-Phuc-Xuan Quynh, Haochen Zhao, Jianxin Wang

Interdiscip Sci· December 2025

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Enhancing Antimicrobial Peptide Function Prediction via Knowledge Transfer on Protein Language Models.
Xiao Liang, Haochen Zhao, Jianxin Wang

IEEE Trans Comput Biol Bioinform· December 2025

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MMFF-DDI: a Multi-Modal Fusion Framework for Drug-Drug Interaction Event Prediction with Contrastive Learning.
Jian Zhong, Haochen Zhao, Guihua Duan, Shaokai Wang

IEEE Trans Comput Biol Bioinform· December 2025

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Tailored ZnCu Conductive MOF as a Floating-Gate in Carbon Nanotube Network FET NH Sensors.
Kun Luo, Xianmao Cao, Haoran Peng, Haochen Zhao, Yifei Xie

ACS Sens· December 2025

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AGPred: An End-to-End Deep Learning Model for Predicting Drug Approvals in Clinical Trials Based on Molecular Features.
Haochen Zhao, Xiao Liang, Chenliang Xie, Shaokai Wang

IEEE J Biomed Health Inform· November 2025

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Probiotic-Disease Association Prediction via Cross-Modal Feature Aggregation.
Haochen Zhao, Bowei Li, Guihua Duan, Jianxin Wang

IEEE Trans Comput Biol Bioinform· October 2025

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Global and regional burden of kidney cancer from 1990 to 2021: analysis and future predictions based on global burden of disease study.
Deng Li, Haochen Zhao, Siqi Fan, Jingxing Bai, Linfen Guo

BMC Cancer· October 2025

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Global Psoriasis Burden 1990-2021: Evolving Patterns and Socio-Demographic Correlates in the Global Burden of Disease 2021 Update.
Deng Li, Siqi Fan, Jiayi Song, Haochen Zhao, Linfen Guo

Healthcare (Basel)· September 2025

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Optimizing Nitrogen Supplementation: Timing Strategies to Mitigate Waterlogging Stress in Winter- and Spring-Type Canola.
Haochen Zhao, Onusha Sharmita, Abu Bakar Siddique, Sergey Shabala, Meixue Zhou, Chenchen Zhao

Plants (Basel)· August 2025

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ColdstartCPI: Induced-fit theory-guided DTI predictive model with improved generalization performance.
Qichang Zhao, Haochen Zhao, Linyuan Guo, Kai Zheng, Yajie Li

Nat Commun· July 2025

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MRLF-DDI: A Multi-view Representation Learning Framework for Drug-Drug Interaction Event Prediction.
Jian Zhong, Haochen Zhao, Xiao Liang, Qichang Zhao, Jianxin Wang

IEEE J Biomed Health Inform· July 2025

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A deep learning-based method for predicting the frequency classes of drug side effects based on multi-source similarity fusion.
Haochen Zhao, Dingxi Li, Jian Zhong, Xiao Liang, Guihua Duan

Bioinformatics· June 2025

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Worldwide trends and future projections of fungal skin disease burden: a comprehensive analysis from the Global Burden of Diseases study 2021.
Deng Li, Siqi Fan, Haochen Zhao, Jiayi Song, Linfen Guo

Front Public Health· June 2025

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Global, regional and national burden of skin and subcutaneous diseases: a systematic analysis of the Global Burden of Disease Study 2021.
Deng Li, Siqi Fan, Haochen Zhao, Jiayi Song, Wei Li

Int Health· June 2025

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Temporal trend in non-melanoma skin cancer mortality in China, 1992-2021: an analysis for the global burden of disease study 2021.
Deng Li, Ge Yan, Shasha Song, Siqi Fan, Haochen Zhao

Front Med (Lausanne)· May 2025

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RGCNPPIS: A Residual Graph Convolutional Network for Protein-Protein Interaction Site Prediction.
Jian Zhong, Haochen Zhao, Qichang Zhao, Ruikang Zhou, Lishen Zhang

IEEE/ACM Trans Comput Biol Bioinform· April 2025

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A Knowledge Graph-Based Method for Drug-Drug Interaction Prediction With Contrastive Learning.
Jian Zhong, Haochen Zhao, Qichang Zhao, Jianxin Wang

IEEE/ACM Trans Comput Biol Bioinform· April 2025

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MPEMDA: A multi-similarity integration approach with pre-completion and error correction for predicting microbe-drug associations.
Yuxiang Li, Haochen Zhao, Jianxin Wang

Methods· March 2025

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Predicting thermodynamic stability of inorganic compounds using ensemble machine learning based on electron configuration.
Hao Zou, Haochen Zhao, Mingming Lu, Jiong Wang, Zeyu Deng

Nat Commun· January 2025

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Self-Aligned Ionic Doping of TiO Thin-Film Transistors for Enhanced Current Drivability via Postfabrication Superacid Treatment.
Jie Zhang, Haochen Zhao, Xiaofeng Ye, Meng Jia, Guangyang Lin

ACS Appl Mater Interfaces· September 2024

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BANDRP: a bilinear attention network for anti-cancer drug response prediction based on fingerprint and multi-omics.
Cheng Cao, Haochen Zhao, Jianxin Wang

Brief Bioinform· September 2024

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Terahertz Sensing of L-Valine and L-Phenylalanine Solutions.
Jingyi Shu, Xinli Zhou, Jixuan Hao, Haochen Zhao, Mingming An, Guozhong Zhao

Sensors (Basel)· June 2024

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MA-PEP: A novel anticancer peptide prediction framework with multimodal feature fusion based on attention mechanism.
Xiao Liang, Haochen Zhao, Jianxin Wang

Protein Sci· April 2024

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Comparison of Remimazolam and Propofol on Postoperative Delirium in Elderly Patients Undergoing Radical Resection of Colon Cancer: A Single-Center Prospective Randomized Controlled Study.
Tianlin Liu, Haochen Zhao, Xiaochen Zhao, Min Qu

Med Sci Monit· April 2024

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SCN-MLTPP: A Multi-Label Classifier for Predicting Therapeutic Properties of Peptides Using the Stacked Capsule Network.
Haochen Zhao, Ruihong Du, Ruikang Zhou, Suning Li, Guihua Duan

IEEE/ACM Trans Comput Biol Bioinform· December 2023

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