Publications by authors named "Jan-Ulrich Kreft"

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Comparison of antibiotic-resistant bacteria and antibiotic resistance genes abundance in hospital and community wastewater: A systematic review.
Nasreen Hassoun-Kheir, Yoav Stabholz, Jan-Ulrich Kreft, Roberto de la Cruz, Jesús L Romalde, Joseph Nesme, Søren J Sørensen, Barth F Smets, David Graham, Mical Paul

Sci Total Environ· November 2020

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Removal of antimicrobial resistance determinants from wastewater: Role of capacity overloading and treatment technology in wastewater treatment plants.
Vikas Sonkar, Arun Kashyap, Rebeca Pallares-Vega, Sai Sugitha Sasidharan, Sangeetha Chandrakalabai Jambu, Jan-Ulrich Kreft

J Environ Manage· December 2025

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A multi-endpoint approach to ecotoxicological assessment of wastewater polluted rivers using zebrafish.
Vikas Sonkar, Sai Sugitha Sasidharan, Sangeetha Chandrakalabai Jambu, Aravind Kumar Rengan, Jan-Ulrich Kreft

Environ Res· October 2025

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Dissecting the physics of bacterial biofilms with agent-based simulations.
Kee-Myoung Nam, Changhao Li, Bastiaan J R Cockx, Danh T Nguyen, Ying Li, Jan-Ulrich Kreft

Curr Opin Solid State Mater Sci· July 2025

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A metagenomic study of antibiotic resistance genes in a hypereutrophic subtropical lake contaminated by anthropogenic sources.
Osiris Díaz-Torres, Eric Oswaldo Valencia-de Los Cobos, Jan-Ulrich Kreft, Frank J Loge, Diego Díaz-Vázquez

Sci Total Environ· June 2024

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Modelling the impact of wastewater flows and management practices on antimicrobial resistance in dairy farms.
Henry Todman, Richard Helliwell, Liz King, Adam Blanchard, Charlotte J Gray-Hammerton, Jan-Ulrich Kreft

NPJ Antimicrob Resist· May 2024

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Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0.
Bastiaan J R Cockx, Tim Foster, Robert J Clegg, Kieran Alden, Sankalp Arya, Jan-Ulrich Kreft

PLoS Comput Biol· February 2024

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Mapping the scarcity of data on antibiotics in natural and engineered water environments across India.
Sasikaladevi Rathinavelu, Cansu Uluseker, Vikas Sonkar, Shashidhar Thatikonda, Indumathi M Nambi, Jan-Ulrich Kreft

Front Antibiot· February 2024

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Flagellar interference with plasmid uptake in biofilms: a joint experimental and modeling study.
Henriette Lyng Røder, Eleni Christidi, Cristina I Amador, Samra Music, Asmus Kalckar Olesen, Jan-Ulrich Kreft

Appl Environ Microbiol· January 2024

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Plasmid permissiveness of wastewater microbiomes can be predicted from 16S rRNA sequences by machine learning.
Danesh Moradigaravand, Liguan Li, Arnaud Dechesne, Joseph Nesme, Roberto de la Cruz, Jan-Ulrich Kreft

Bioinformatics· July 2023

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Comment on "Different microplastics distinctively enriched the antibiotic resistance genes in anaerobic sludge digestion through shifting specific hosts and promoting horizontal gene flow by Luo et al. [Water Research 228 (2023), 119356]".
Jan-Ulrich Kreft

Water Res· May 2023

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The role of mathematical modelling in understanding prokaryotic predation.
J Kimberley Summers, Jan-Ulrich Kreft

Front Microbiol· December 2022

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Antimicrobial resistance in dairy slurry tanks: A critical point for measurement and control.
Michelle Baker, Alexander D Williams, Steven P T Hooton, Richard Helliwell, Elizabeth King, Jan-Ulrich Kreft

Environ Int· November 2022

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Experimental evolution of Pseudomonas putida under silver ion versus nanoparticle stress.
Feng Dong, Ana C Quevedo, Xiang Wang, Eugenia Valsami-Jones, Jan-Ulrich Kreft

Environ Microbiol· February 2022

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Predation Strategies of the Bacterium Bdellovibrio bacteriovorus Result in Overexploitation and Bottlenecks.
J Kimberley Summers, Jan-Ulrich Kreft

Appl Environ Microbiol· January 2022

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EMBRACE-WATERS statement: Recommendations for reporting of studies on antimicrobial resistance in wastewater and related aquatic environments.
Nasreen Hassoun-Kheir, Yoav Stabholz, Jan-Ulrich Kreft, Roberto de la Cruz, Arnaud Dechesne

One Health· December 2021

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Towards a general model for predicting minimal metal concentrations co-selecting for antibiotic resistance plasmids.
Sankalp Arya, Alexander Williams, Saul Vazquez Reina, Charles W Knapp, Jan-Ulrich Kreft

Environ Pollut· April 2021

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Damage Repair versus Aging in an Individual-Based Model of Biofilms.
Robyn J Wright, Robert J Clegg, Timothy L R Coker, Jan-Ulrich Kreft

mSystems· October 2020

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A generalised model for generalised transduction: the importance of co-evolution and stochasticity in phage mediated antimicrobial resistance transfer.
Sankalp Arya, Henry Todman, Michelle Baker, Steven Hooton, Andrew Millard, Jan-Ulrich Kreft

FEMS Microbiol Ecol· July 2020

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Toward Engineering Biosystems With Emergent Collective Functions.
Thomas E Gorochowski, Sabine Hauert, Jan-Ulrich Kreft, Lucia Marucci, Namid R Stillman

Front Bioeng Biotechnol· June 2020

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Evolutionary causes and consequences of metabolic division of labour: why anaerobes do and aerobes don't.
Jan-Ulrich Kreft, Benjamin M Griffin, Rebeca González-Cabaleiro

Curr Opin Biotechnol· April 2020

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Potentiation of curing by a broad-host-range self-transmissible vector for displacing resistance plasmids to tackle AMR.
Alessandro Lazdins, Anand Prakash Maurya, Claire E Miller, Muhammad Kamruzzaman, Shuting Liu, Jan-Ulrich Kreft

PLoS One· March 2020

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Dual Predation by Bacteriophage and Can Eradicate Prey in Situations where Single Predation Cannot.
Laura Hobley, J Kimberley Summers, Rob Till, David S Milner, Robert J Atterbury, Jan-Ulrich Kreft

J Bacteriol· February 2020

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Editorial: The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling.
Johan H J Leveau, Ferdi L Hellweger, Jan-Ulrich Kreft, Clara Prats, Weiwen Zhang

Front Microbiol· November 2018

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From Genes to Ecosystems in Microbiology: Modeling Approaches and the Importance of Individuality.
Jan-Ulrich Kreft, Caroline M Plugge, Clara Prats, Johan H J Leveau, Weiwen Zhang

Front Microbiol· November 2017

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