Publications by authors named "Jeffrey Barrick"

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Protecting honey bees through microbiome engineering.
Lucio Navarro-Escalante, A H M Zuberi Ashraf, Sean P Leonard, Jeffrey E Barrick

Curr Opin Insect Sci· December 2025

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Evolution in response to prophage activation attenuates the virulence of culturable relatives of aphid endosymbionts.
Anthony J VanDieren, Jeffrey E Barrick

mBio· October 2025

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Phages use contingency loci as a bet-hedging strategy.
Jasper B Gomez, Jeffrey E Barrick, Christopher M Waters

bioRxiv· October 2025

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Genome evolution of ADP1 during laboratory domestication: acquired mutations impact competence and metabolism.
Isaac Gifford, Meghna R Vergis, Jeffrey E Barrick

Appl Environ Microbiol· September 2025

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Evolutionary loss of an antibiotic efflux pump increases Pseudomonas aeruginosa quorum sensing mediated virulence in vivo.
Sheryl E Fernandes, Humberto Ortega, Mylene Vaillancourt, Anna Clara M Galdino, Aleksandr Stotland, Jeffrey E Barrick

Nat Commun· September 2025

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Engineered ADP1-ISx Cells Are Sensitive DNA Biosensors for Antibiotic Resistance Genes and a Fungal Pathogen of Bats.
Jeffrey Chuong, Keaton W Brown, Isaac Gifford, Dennis M Mishler, Jeffrey E Barrick

ACS Synth Biol· July 2025

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Continuously high Wolbachia incidence in flea populations may result from dual-strain infections with divergent effects.
Ron Flatau, Aleksandra I Krawczyk, Michal Segoli, Jeffrey E Barrick, Hadas Hawlena

Sci Rep· July 2025

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A-to-I mRNA editing recodes hundreds of genes in dozens of species and produces endogenous protein isoforms in bacteria.
Eyal Elias, Isaac Gifford, Liron Didi, Ofir Fargeon, Danielle Arad, Jeffrey E Barrick

Nucleic Acids Res· July 2025

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Simulated microgravity triggers a membrane adaptation to stress in E. coli REL606.
Brittney Lozzi, Lea Adepoju, Josh L Espinoza, Michael Padgen, Macarena Parra, Jeffrey E Barrick

BMC Microbiol· June 2025

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Codon usage modulates the relationship between the burden and yield of protein overexpression.
Cameron T Roots, Alexis M Hill, Claus O Wilke, Jeffrey E Barrick

J Biol Eng· May 2025

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Cell-Free Expression of Soluble Leafhopper Proteins from Brochosomes.
Caleb G Lay, Gabriel R Burks, Zheng Li, Jeffrey E Barrick, Charles M Schroeder

ACS Synth Biol· March 2025

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CryptKeeper: a negative design tool for reducing unintentional gene expression in bacteria.
Cameron T Roots, Jeffrey E Barrick

Synth Biol (Oxf)· December 2024

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Evolutionary loss of an antibiotic efflux pump increases quorum sensing mediated virulence .
Sheryl E Fernandes, Humberto Ortega, Mylene Vaillancourt, Anna Clara M Galdino, Aleksandr Stotland, Jeffrey E Barrick

Res Sq· November 2024

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Modeling and measuring how codon usage modulates the relationship between burden and yield during protein overexpression in bacteria.
Cameron T Roots, Alexis M Hill, Claus O Wilke, Jeffrey E Barrick

bioRxiv· November 2024

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Virulence-linked adhesin drives mutualist colonization of the bee gut via biofilm formation.
Patrick J Lariviere, A H M Zuberi Ashraf, Isaac Gifford, Sylvia L Tanguma, Jeffrey E Barrick

bioRxiv· October 2024

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One-step genome engineering in bee gut bacterial symbionts.
Patrick J Lariviere, A H M Zuberi Ashraf, Lucio Navarro-Escalante, Sean P Leonard, Laurel G Miller, Jeffrey E Barrick

mBio· September 2024

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CryptKeeper: a negative design tool for reducing unintentional gene expression in bacteria.
Cameron T Roots, Jeffrey E Barrick

bioRxiv· September 2024

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Evolution recovers the fitness of Acinetobacter baylyi strains with large deletions through mutations in deletion-specific targets and global post-transcriptional regulators.
Isaac Gifford, Gabriel A Suárez, Jeffrey E Barrick

PLoS Genet· September 2024

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Pathogen contingency loci and the evolution of host specificity: Simple sequence repeats mediate Bartonella adaptation to a wild rodent host.
Ruth Rodríguez-Pastor, Nadav Knossow, Naama Shahar, Adam Z Hasik, Daniel E Deatherage, Jeffrey E Barrick

PLoS Pathog· September 2024

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Measuring the burden of hundreds of BioBricks defines an evolutionary limit on constructability in synthetic biology.
Noor Radde, Genevieve A Mortensen, Diya Bhat, Shireen Shah, Joseph J Clements, Jeffrey E Barrick

Nat Commun· July 2024

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Promoter recruitment drives the emergence of proto-genes in a long-term evolution experiment with Escherichia coli.
Md Hassan Uz-Zaman, Simon D'Alton, Jeffrey E Barrick, Howard Ochman

PLoS Biol· May 2024

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Identifying widespread and recurrent variants of genetic parts to improve annotation of engineered DNA sequences.
Matthew J McGuffie, Jeffrey E Barrick

PLoS One· May 2024

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Measuring the burden of hundreds of BioBricks defines an evolutionary limit on constructability in synthetic biology.
Noor Radde, Genevieve A Mortensen, Diya Bhat, Shireen Shah, Joseph J Clements, Jeffrey E Barrick

bioRxiv· April 2024

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Promoter capture drives the emergence of proto-genes in .
Md Hassan Uz-Zaman, Simon D'Alton, Jeffrey E Barrick, Howard Ochman

bioRxiv· November 2023

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