Publications by authors named "Jeffrey D Jensen"

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Loci associated with skin pigmentation identified in African populations.
Nicholas G Crawford, Derek E Kelly, Matthew E B Hansen, Marcia H Beltrame, Shaohua Fan, Shanna L Bowman, Ethan Jewett, Alessia Ranciaro, Simon Thompson, Yancy Lo

Science· November 2017

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A draft sequence of the Neandertal genome.
Richard E Green, Johannes Krause, Adrian W Briggs, Tomislav Maricic, Udo Stenzel, Martin Kircher, Nick Patterson, Heng Li, Weiwei Zhai, Markus Hsi-Yang Fritz

Science· May 2010

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Interpreting Patterns of X Chromosomal Relative to Autosomal Diversity in Aye-Ayes (Daubentonia madagascariensis).
John W Terbot, Vivak Soni, Cyril J Versoza, Mark Milhaven, Adriana Calahorra-Oliart, Jeffrey D Jensen

Am J Primatol· December 2025

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Recent Insights Into the Evolutionary Genomics of the Critically Endangered Aye-Aye (Daubentonia madagascariensis).
Vivak Soni, Susanne P Pfeifer, Jeffrey D Jensen

Am J Primatol· December 2025

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Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets (Callithrix jacchus).
Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

Heredity (Edinb)· November 2025

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Inferring Fine-Scale Mutation and Recombination Rate Maps in Aye-Ayes ().
Vivak Soni, Cyril J Versoza, John W Terbot, Jeffrey D Jensen, Susanne P Pfeifer

Ecol Evol· November 2025

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Re-Evaluating the Demographic History of, and Inferring the Fine-Scale Recombination Landscape For, Wild Chinese Rhesus Macaques (Macaca mulatta).
John W Terbot, Adriana Calahorra-Oliart, Cyril J Versoza, Devangana Shah, Vivak Soni, Jeffrey D Jensen

Am J Primatol· November 2025

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The Landscape of Structural Variation in Aye-Ayes (Daubentonia madagascariensis).
Cyril J Versoza, Jeffrey D Jensen, Susanne P Pfeifer

Genome Biol Evol· September 2025

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A whole-genome scan for evidence of positive and balancing selection in aye-ayes (Daubentonia madagascariensis) utilizing a well-fit evolutionary baseline model.
Vivak Soni, John W Terbot, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

G3 (Bethesda)· July 2025

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Estimating the Distribution of Fitness Effects in Aye-Ayes (Daubentonia madagascariensis), Accounting for Population History as Well as Mutation and Recombination Rate Heterogeneity.
Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

Am J Primatol· July 2025

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Inferring the landscapes of mutation and recombination in the common marmoset ( ) in the presence of twinning and hematopoietic chimerism.
Vivak Soni, Cyril J Versoza, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· July 2025

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Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets ( ).
Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

bioRxiv· July 2025

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Accounting for Chimerism in Demographic Inference: Reconstructing the History of Common Marmosets (Callithrix jacchus) from High-Quality, Whole-Genome, Population-Level Data.
Vivak Soni, Cyril J Versoza, Eric J Vallender, Jeffrey D Jensen, Susanne P Pfeifer

Mol Biol Evol· June 2025

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Inferring demographic and selective histories from population genomic data using a 2-step approach in species with coding-sparse genomes: an application to human data.
Vivak Soni, Jeffrey D Jensen

G3 (Bethesda)· April 2025

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A Pedigree-Based Map of Crossovers and Noncrossovers in Aye-Ayes (Daubentonia madagascariensis).
Cyril J Versoza, Audald Lloret-Villas, Jeffrey D Jensen, Susanne P Pfeifer

Genome Biol Evol· April 2025

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Characterizing the Rates and Patterns of De Novo Germline Mutations in the Aye-Aye (Daubentonia madagascariensis).
Cyril J Versoza, Erin E Ehmke, Jeffrey D Jensen, Susanne P Pfeifer

Mol Biol Evol· March 2025

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Accounting for chimerism in demographic inference: reconstructing the history of common marmosets ( ) from high-quality, whole-genome, population-level data.
Vivak Soni, Cyril J Versoza, Eric J Vallender, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· February 2025

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Inferring the Demographic History of Aye-Ayes (Daubentonia madagascariensis) from High-Quality, Whole-Genome, Population-Level Data.
John W Terbot, Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

Genome Biol Evol· January 2025

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Estimating the distribution of fitness effects in aye-ayes ( ), accounting for population history as well as mutation and recombination rate heterogeneity.
Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

bioRxiv· January 2025

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Interpreting patterns of X chromosomal relative to autosomal diversity in aye-ayes ( ).
John W Terbot, Vivak Soni, Cyril J Versoza, Mark Milhaven, Adriana Calahorra-Oliart, Jeffrey D Jensen

bioRxiv· January 2025

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Inferring fine-scale mutation and recombination rate maps in aye-ayes ( ).
Vivak Soni, Cyril J Versoza, John W Terbot, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· December 2024

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A pedigree-based map of crossovers and non-crossovers in aye-ayes ().
Cyril J Versoza, Audald Lloret-Villas, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· November 2024

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Characterizing the rates and patterns of germline mutations in the aye-aye ().
Cyril J Versoza, Erin E Ehmke, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· November 2024

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Inferring demographic and selective histories from population genomic data using a two-step approach in species with coding-sparse genomes: an application to human data.
Vivak Soni, Jeffrey D Jensen

bioRxiv· November 2024

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A whole-genome scan for evidence of recent positive and balancing selection in aye-ayes () utilizing a well-fit evolutionary baseline model.
Vivak Soni, John W Terbot, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

bioRxiv· November 2024

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Inferring the demographic history of aye-ayes () from high-quality, whole-genome, population-level data.
John W Terbot, Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen

bioRxiv· November 2024

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The landscape of structural variation in aye-ayes ().
Cyril J Versoza, Jeffrey D Jensen, Susanne P Pfeifer

bioRxiv· November 2024

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