Publications by authors named "Manjari Anant"

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Gene count normalization in single-cell imaging-based spatially resolved transcriptomics.
Lyla Atta, Kalen Clifton, Manjari Anant, Gohta Aihara, Jean Fan

June 2024

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DART: A GUI Pipeline for Aligning Histological Brain Sections to 3D Atlases and Automating Laser Microdissection.
Rishi Koneru, Manjari Anant, Hyopil Kim, Julian Cheron, Justus M Kebschull

bioRxiv· September 2025

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Characterizing cell-type spatial relationships across length scales in spatially resolved omics data.
Rafael Dos Santos Peixoto, Brendan F Miller, Maigan A Brusko, Gohta Aihara, Lyla Atta, Manjari Anant

Nat Commun· January 2025

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Characterizing cell-type spatial relationships across length scales in spatially resolved omics data.
Rafael Dos Santos Peixoto, Brendan F Miller, Maigan A Brusko, Gohta Aihara, Lyla Atta, Manjari Anant

bioRxiv· September 2024

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Cross-modality mapping using image varifolds to align tissue-scale atlases to molecular-scale measures with application to 2D brain sections.
Kaitlin M Stouffer, Alain Trouvé, Laurent Younes, Michael Kunst, Lydia Ng, Manjari Anant

Nat Commun· April 2024

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Gene count normalization in single-cell imaging-based spatially resolved transcriptomics.
Lyla Atta, Kalen Clifton, Manjari Anant, Gohta Aihara, Jean Fan

bioRxiv· March 2024

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STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping.
Kalen Clifton, Manjari Anant, Gohta Aihara, Lyla Atta, Osagie K Aimiuwu

Nat Commun· December 2023

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Alignment of spatial transcriptomics data using diffeomorphic metric mapping.
Kalen Clifton, Manjari Anant, Gohta Aihara, Lyla Atta, Osagie K Aimiuwu

bioRxiv· August 2023

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A Universal Method for Crossing Molecular and Atlas Modalities using Simplex-Based Image Varifolds and Quadratic Programming.
Kaitlin M Stouffer, Alain Trouv, Laurent Younes, Michael Kunst, Lydia Ng, Manjari Anant

bioRxiv· March 2023

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