Publications by authors named "Mark D Wilkinson"

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The FAIR Guiding Principles for scientific data management and stewardship.
Mark D Wilkinson, Michel Dumontier, I Jsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E Bourne

Sci Data· March 2016

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The FAIR journey of a patient-driven registry: Reflections and practical solutions from the Duchenne Data Platform FAIRification experience.
Nawel Lalout, Mark D Wilkinson, Dagmar Wandrei, Adrian Tassoni, Antonio Atalaia

J Neuromuscul Dis· October 2025

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SIMPATHIC: Accelerating drug repurposing for rare diseases by exploiting SIMilarities in clinical and molecular PATHology.
Clara D M van Karnebeek, Annelieke R Müller, Laura Benkemoun, Ibrahim Boussaad, Martina C Cornel, Mark D Wilkinson

Mol Genet Metab· April 2025

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The FLAIR-GG federated network of FAIR germplasm data resources.
Alberto Cámara Ballesteros, Elena Aguayo Jara, Evrykleia Sofia Verykaki, Germán Pastor Del Olmo, Santiago Moreno Vázquez, Mark D Wilkinson

Sci Data· December 2024

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RNAi suppression of xylan synthase genes in wheat starchy endosperm.
Mark D Wilkinson, Ondrej Kosik, Kirstie Halsey, Hannah Walpole, Jessica Evans

PLoS One· July 2024

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Brassica rapa CURLY LEAF is a major H3K27 methyltransferase regulating flowering time.
Laura Poza-Viejo, Miriam Payá-Milans, Mark D Wilkinson, Manuel Piñeiro, José A Jarillo

Planta· June 2024

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Common conditions of use elements. Atomic concepts for consistent and effective information governance.
Maria Del Carmen Sanchez Gonzalez, Pim Kamerling, Mariapia Iermito, Sara Casati, Umar Riaz, Mark D Wilkinson

Sci Data· May 2024

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Getting your DUCs in a row - standardising the representation of Digital Use Conditions.
Francis Jeanson, Spencer J Gibson, Pinar Alper, Alexander Bernier, J Patrick Woolley, Mark D Wilkinson

Sci Data· May 2024

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FAIR Header Reference genome: a TRUSTworthy standard.
Adam Wright, Mark D Wilkinson, Christopher Mungall, Scott Cain, Stephen Richards

Brief Bioinform· March 2024

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EURO-NMD registry: federated FAIR infrastructure, innovative technologies and concepts of a patient-centred registry for rare neuromuscular disorders.
Antonio Atalaia, Dagmar Wandrei, Nawel Lalout, Rachel Thompson, Adrian Tassoni, Mark D Wilkinson

Orphanet J Rare Dis· February 2024

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DATA RESOURCES AND ANALYSES FAIR Header Reference genome: A TRUSTworthy standard.
Adam Wright, Mark D Wilkinson, Chris Mungall, Scott Cain, Stephen Richards

bioRxiv· December 2023

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Community-driven governance of FAIRness assessment: an open issue, an open discussion.
Mark D Wilkinson, Susanna-Assunta Sansone, Eva Méndez, Romain David, Richard Dennis

Open Res Eur· September 2023

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Testing the stress gradient hypothesis in soil bacterial communities associated with vegetation belts in the Andean Atacama Desert.
Dinka Mandakovic, Constanza Aguado-Norese, Beatriz García-Jiménez, Christian Hodar, Jonathan E Maldonado, Mark D Wilkinson

Environ Microbiome· March 2023

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Towards FAIRification of sensitive and fragmented rare disease patient data: challenges and solutions in European reference network registries.
Bruna Dos Santos Vieira, César H Bernabé, Shuxin Zhang, Haitham Abaza, Nirupama Benis, Mark D Wilkinson

Orphanet J Rare Dis· December 2022

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The malaria parasite chaperonin containing TCP-1 (CCT) complex: Data integration with other CCT proteomes.
Mark D Wilkinson, Josie L Ferreira, Morgan Beeby, Jake Baum, Keith R Willison

Front Mol Biosci· December 2022

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The Indole-3-Acetamide-Induced Transcription Factor MYB74 Decreases Plant Growth and Contributes to the Control of Osmotic Stress Responses.
Paloma Ortiz-García, Marta-Marina Pérez-Alonso, Adrián González Ortega-Villaizán, Beatriz Sánchez-Parra, Jutta Ludwig-Müller, Mark D Wilkinson

Front Plant Sci· June 2022

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Conserved and distinct roles of H3K27me3 demethylases regulating flowering time in Brassica rapa.
Laura Poza-Viejo, Miriam Payá-Milans, Patxi San Martín-Uriz, Laura Castro-Labrador, David Lara-Astiaso, Mark D Wilkinson

Plant Cell Environ· May 2022

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Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data.
Rajaram Kaliyaperumal, Mark D Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet

J Biomed Semantics· March 2022

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Understanding the Relationships between Free Asparagine in Grain and Other Traits to Breed Low-Asparagine Wheat.
Joseph Oddy, Sarah Raffan, Mark D Wilkinson, J Stephen Elmore, Nigel G Halford

Plants (Basel)· February 2022

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Predicting microbiomes through a deep latent space.
Beatriz García-Jiménez, Jorge Muñoz, Sara Cabello, Joaquín Medina, Mark D Wilkinson

Bioinformatics· June 2021

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Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and abscisic acid, and trigger plant stress responses in Arabidopsis.
Marta-Marina Pérez-Alonso, Paloma Ortiz-García, José Moya-Cuevas, Thomas Lehmann, Beatriz Sánchez-Parra, Mark D Wilkinson

J Exp Bot· February 2021

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The TaCslA12 gene expressed in the wheat grain endosperm synthesizes wheat-like mannan when expressed in yeast and Arabidopsis.
Yves Verhertbruggen, Axelle Bouder, Jacqueline Vigouroux, Camille Alvarado, Audrey Geairon, Mark D Wilkinson

Plant Sci· January 2021

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Correction: Single-molecule nanopore sensing of actin dynamics and drug binding.
Xiaoyi Wang, Mark D Wilkinson, Xiaoyan Lin, Ren Ren, Keith R Willison

Chem Sci· July 2020

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A Biosynthetic Platform for Antimalarial Drug Discovery.
Mark D Wilkinson, Hung-En Lai, Paul S Freemont, Jake Baum

Antimicrob Agents Chemother· April 2020

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Data-driven classification of the certainty of scholarly assertions.
Mario Prieto, Helena Deus, Anita de Waard, Erik Schultes, Beatriz García-Jiménez, Mark D Wilkinson

PeerJ· April 2020

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Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa.
Miriam Payá-Milans, Laura Poza-Viejo, Patxi San Martín-Uriz, David Lara-Astiaso, Mark D Wilkinson

Gigascience· December 2019

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