Publications by authors named "Markus Buehler"

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MultiCell: geometric learning in multicellular development.
Haiqian Yang, George Roy, Anh Q Nguyen, Dapeng Bi, Tomer Stern, Markus J Buehler

Nat Methods· December 2025

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Molecular-Scale Interactions at Mineralized Collagen Interfaces Prevent Network Percolation, Preserving Compliance.
Amadeus C S de Alcântara, Mario Milazzo, Eesha Khare, Munir S Skaf, Stavros Thomopoulos, Markus J Buehler

ACS Nano· September 2025

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SciAgents: Automating Scientific Discovery Through Bioinspired Multi-Agent Intelligent Graph Reasoning.
Alireza Ghafarollahi, Markus J Buehler

Adv Mater· June 2025

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Exploring Nature's Toolbox: The Role of Biopolymers in Sustainable Materials Science.
Yingying Zhang, Shengjie Ling, Wenshuai Chen, Markus J Buehler, David L Kaplan

Adv Mater· June 2025

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High-throughput Screening of the Mechanical Properties of Peptide Assemblies.
Sarah K Yorke, Zhenze Yang, Aviad Levin, Alice Ray, Jeremy Owusu Boamah, Markus J Buehler

ArXiv· May 2025

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3D Printable Biocomposites with Tunable Environmental Degradability.
Hannah B Gazdus, Sabrina C Shen, Nicolas A Lee, Markus J Buehler

3D Print Addit Manuf· April 2025

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Molecular analysis and design using generative artificial intelligence multi-agent modeling.
Isabella Stewart, Markus J Buehler

Mol Syst Des Eng· March 2025

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Discovery of mammalian collagens I and III within ancient poriferan biopolymer spongin.
Hermann Ehrlich, Ivan Miksik, Mikhail V Tsurkan, Paul Simon, Filip Porzucek, Markus J Buehler

Nat Commun· March 2025

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Sewage sludge hydrochar characterization and valorization via hydrothermal processing for 3D printing.
Sabrina C Shen, Branden Spitzer, Damian Stefaniuk, Shengfei Zhou, Admir Masic, Markus J Buehler

Commun Eng· March 2025

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Learning the rules of peptide self-assembly through data mining with large language models.
Zhenze Yang, Sarah K Yorke, Tuomas P J Knowles, Markus J Buehler

Sci Adv· March 2025

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Automating alloy design and discovery with physics-aware multimodal multiagent AI.
Alireza Ghafarollahi, Markus J Buehler

Proc Natl Acad Sci U S A· January 2025

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Modeling protein motions through reinforcement learning.
Alireza Ghafarollahi, Markus J Buehler

Proc Natl Acad Sci U S A· December 2024

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Learning collective cell migratory dynamics from a static snapshot with graph neural networks.
Haiqian Yang, Florian Meyer, Shaoxun Huang, Liu Yang, Cristiana Lungu, Markus J Buehler

ArXiv· November 2024

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ProtAgents: protein discovery large language model multi-agent collaborations combining physics and machine learning.
Alireza Ghafarollahi, Markus J Buehler

Digit Discov· July 2024

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Multicell-Fold: geometric learning in folding multicellular life.
Haiqian Yang, Anh Q Nguyen, Dapeng Bi, Markus J Buehler, Ming Guo

ArXiv· July 2024

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Heterogeneous and Cooperative Rupture of Histidine-Ni Metal-Coordination Bonds on Rationally Designed Protein Templates.
Eesha Khare, Constancio Gonzalez Obeso, Zaira Martín-Moldes, Ayesha Talib, David L Kaplan, Markus J Buehler

ACS Biomater Sci Eng· May 2024

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Robust myco-composites: a biocomposite platform for versatile hybrid-living materials.
Sabrina C Shen, Nicolas A Lee, William J Lockett, Aliai D Acuil, Hannah B Gazdus, Markus J Buehler

Mater Horiz· April 2024

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Generative Retrieval-Augmented Ontologic Graph and Multiagent Strategies for Interpretive Large Language Model-Based Materials Design.
Markus J Buehler

ACS Eng Au· April 2024

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BioinspiredLLM: Conversational Large Language Model for the Mechanics of Biological and Bio-Inspired Materials.
Rachel K Luu, Markus J Buehler

Adv Sci (Weinh)· March 2024

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Crosslinker energy landscape effects on dynamic mechanical properties of ideal polymer hydrogels.
Eesha Khare, Amadeus C S de Alcântara, Nic Lee, Munir S Skaf, Markus J Buehler

Mater Adv· March 2024

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ForceGen: End-to-end de novo protein generation based on nonlinear mechanical unfolding responses using a language diffusion model.
Bo Ni, David L Kaplan, Markus J Buehler

Sci Adv· February 2024

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ForceGen: End-to-end protein generation based on nonlinear mechanical unfolding responses using a protein language diffusion model.
Bo Ni, David L Kaplan, Markus J Buehler

ArXiv· December 2023

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Untapped Potential of Deep Eutectic Solvents for the Synthesis of Bioinspired Inorganic-Organic Materials.
Marcin Wysokowski, Rachel K Luu, Sofia Arevalo, Eesha Khare, Witold Stachowiak, Markus J Buehler

Chem Mater· October 2023

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Modeling and design of heterogeneous hierarchical bioinspired spider web structures using deep learning and additive manufacturing.
Wei Lu, Nic A Lee, Markus J Buehler

Proc Natl Acad Sci U S A· August 2023

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Generative design of proteins based on secondary structure constraints using an attention-based diffusion model.
Bo Ni, David L Kaplan, Markus J Buehler

Chem· July 2023

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