Publications by authors named "Matthew C Ross"

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The gut mycobiome of the Human Microbiome Project healthy cohort.
Andrea K Nash, Thomas A Auchtung, Matthew C Wong, Daniel P Smith, Jonathan R Gesell, Matthew C Ross, Christopher J Stewart, Ginger A Metcalf, Donna M Muzny, Richard A Gibbs

Microbiome· November 2017

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Correction: Inflammation Mediated by Gut Microbiome Promotes Immune Suppression and Lung Adenocarcinoma Progression.
Zahraa Rahal, Yuejiang Liu, Fuduan Peng, Sujuan Yang, Mohamed A Jamal, Matthew C Ross

Cancer Immunol Res· October 2025

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Nasopharyngeal Microbiome-Epigenome-Wide Association Analysis in Infants With Severe Bronchiolitis.
Ryohei Shibata, Yijun Li, Anat Yaskolka Meir, Sara Javornik Cregeen, Matthew Clayton Ross

Allergy· October 2025

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Sequencing-Based Detection of Measles in Wastewater: Texas, January 2025.
Sara Javornik Cregeen, Michael J Tisza, Blake Hanson, Marissa Cook, Anil Surathu, Matthew C Ross

Am J Public Health· July 2025

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Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes.
Jutta E Laiho, Sami Oikarinen, Sofia Morfopoulou, Maarit Oikarinen, Ashlie Renner, Matthew C Ross

Diabetologia· June 2025

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Inflammation Mediated by Gut Microbiome Alterations Promotes Lung Cancer Development and an Immunosuppressed Tumor Microenvironment.
Zahraa Rahal, Yuejiang Liu, Fuduan Peng, Sujuan Yang, Mohamed A Jamal, Matthew C Ross

Cancer Immunol Res· December 2024

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Sequencing-Based Detection of Avian Influenza A(H5N1) Virus in Wastewater in Ten Cities.
Michael J Tisza, Blake M Hanson, Justin R Clark, Li Wang, Katelyn Payne, Matthew C Ross

N Engl J Med· September 2024

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INTRA- AND INTER-HOST EVOLUTION OF HUMAN NOROVIRUS IN HEALTHY ADULTS.
Sasirekha Ramani, Sara J Javornik Cregeen, Anil Surathu, Frederick H Neill, Donna M Muzny, Matthew C Ross

bioRxiv· September 2024

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Examining intra-host genetic variation of RSV by short read high-throughput sequencing.
David Henke, Felipe-Andrés Piedra, Vasanthi Avadhanula, Harsha Doddapaneni, Donna M Muzny, Matthew C Ross

bioRxiv· September 2024

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Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes.
Jutta E Laiho, Sami Oikarinen, Sofia Morfopoulou, Maarit Oikarinen, Ashlie Renner, Matthew C Ross

medRxiv· September 2024

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Tryptophan Metabolites And Their Predicted Microbial Sources In Fecal Samples From Healthy Individuals.
Cynthia L Chappell, Kristi L Hoffman, Philip L Lorenzi, Lin Tan, Joseph Petrosino, Matthew C Ross

bioRxiv· February 2024

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Wastewater sequencing reveals community and variant dynamics of the collective human virome.
Michael Tisza, Sara Javornik Cregeen, Vasanthi Avadhanula, Ping Zhang, Tulin Ayvaz, Matthew C Ross

Nat Commun· October 2023

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Functional Genomics of Gastrointestinal Isolated from Patients with Cancer and Diarrhea.
Hannah Carter, Justin Clark, Lily G Carlin, Ellen Vaughan, Anubama Rajan, Matthew C Ross

bioRxiv· June 2023

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Wastewater pandemic preparedness: Toward an end-to-end pathogen monitoring program.
Justin R Clark, Austen Terwilliger, Vasanthi Avadhanula, Michael Tisza, Juwan Cormier, Matthew Clayton Ross

Front Public Health· April 2023

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Modeling nonsegmented negative-strand RNA virus (NNSV) transcription with ejective polymerase collisions and biased diffusion.
Felipe-Andrés Piedra, David Henke, Anubama Rajan, Donna M Muzny, Harsha Doddapaneni, Matthew C Ross

Front Mol Biosci· January 2023

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Fully resolved assembly of Cryptosporidium parvum.
Vipin K Menon, Pablo C Okhuysen, Cynthia L Chappell, Medhat Mahmoud, Medhat Mahmoud, Matthew C Ross

Gigascience· February 2022

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Metagenomic Information Recovery from Human Stool Samples Is Influenced by Sequencing Depth and Profiling Method.
Tasha M Santiago-Rodriguez, Aaron Garoutte, Emmase Adams, Waleed Nasser, Matthew C Ross

Genes (Basel)· November 2020

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Prospective virome analyses in young children at increased genetic risk for type 1 diabetes.
Kendra Vehik, Kristian F Lynch, Matthew C Wong, Xiangjun Tian, Matthew C Ross

Nat Med· December 2019

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Green Tea Polyphenols Modify the Gut Microbiome in db/db Mice as Co-Abundance Groups Correlating with the Blood Glucose Lowering Effect.
Tingting Chen, Anna B Liu, Shili Sun, Nadim J Ajami, Matthew C Ross

Mol Nutr Food Res· April 2019

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Temporal development of the gut microbiome in early childhood from the TEDDY study.
Christopher J Stewart, Nadim J Ajami, Jacqueline L O'Brien, Diane S Hutchinson, Daniel P Smith, Matthew C Ross

Nature· October 2018

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Maximal viral information recovery from sequence data using VirMAP.
Nadim J Ajami, Matthew C Wong, Matthew C Ross, Richard E Lloyd, Joseph F Petrosino

Nat Commun· August 2018

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Infection of the Small Intestine Induces Chronic Colitis in Genetically Susceptible Hosts.
Sara M Dann, Christine H Y Le, Elaine M Hanson, Matthew C Ross, Lars Eckmann

J Immunol· July 2018

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16S gut community of the Cameron County Hispanic Cohort.
Matthew C Ross, Donna M Muzny, Joseph B McCormick, Richard A Gibbs, Susan P Fisher-Hoch

Microbiome· March 2015

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Monotonous diets protect against acute colitis in mice: epidemiologic and therapeutic implications.
Dorottya Nagy-Szakal, Sabina A V Mir, Matthew C Ross, Nina Tatevian, Joseph F Petrosino

J Pediatr Gastroenterol Nutr· May 2013

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Maternal micronutrients can modify colonic mucosal microbiota maturation in murine offspring.
Dorottya Nagy-Szakal, Matthew C Ross, Scot E Dowd, Sabina A V Mir, Tiffany D Schaible

Gut Microbes· February 2013

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