Publications by authors named "Rajeev Azad"

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Comprehensive multifaceted gene network analysis towards understanding multi-metal and oxidative stress responses in Synechocystis PCC 6803.
Srabani Kar, Eetika Chot, Ahmad Bereimipour, Rajeev K Azad, Pratyoosh Shukla

Comput Biol Med· December 2025

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bHLH35 mediates specificity in plant responses to multiple stress conditions.
Ranjita Sinha, Sara I Zandalinas, María Ángeles Peláez-Vico, Devasantosh Mohanty, Abdul Ghani, Rajeev K Azad

Sci Adv· December 2025

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Inference of Cytochrome P450 Evolutionary History Using Structural and Physicochemical Metrics.
Jamie D Dixson, Abhijay Azad, Pamela A Padilla, Rajeev K Azad

Genome Biol Evol· September 2025

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Mechanistic Models of Virus-Bacteria Co-Infections in Humans: A Systematic Review of Methods and Assumptions.
Mani Dhakal, Brajendra K Singh, Rajeev K Azad

Pathogens· August 2025

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RareNet: a deep learning model for rare cancer diagnosis.
Danyang Shao, Sohan Addagudi, Joseph Cowles, Arnav Jain, Lauren D'Souza, Rajeev K Azad

Sci Rep· July 2025

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bHLH35 mediates specificity in plant responses to multiple stress conditions.
Ranjita Sinha, Sara I Zandalinas, María Ángeles Peláez-Vico, Abdul Ghani, Mather A Khan, Rajeev K Azad

bioRxiv· May 2025

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Physicochemical Evaluation of Remote Homology in the Twilight Zone.
Jamie Dennis Dixson, Rajeev Kumar Azad

Proteins· February 2025

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An Analysis of Combined Molecular Weight and Hydrophobicity Similarity between the Amino Acid Sequences of Spike Protein Receptor Binding Domains of Betacoronaviruses and Functionally Similar Sequences from Other Virus Families.
Jamie D Dixson, Lavanya Vumma, Rajeev K Azad

Microorganisms· October 2024

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An RNA-Seq Data Analysis Pipeline.
Soham Sengupta, Rajeev K Azad

Methods Mol Biol· July 2024

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RNA Sequencing Experimental Analysis Workflow Using Caenorhabditis elegans.
Jose Robledo, Saifun Ripa Nahar, Manuel A Ruiz, Raymond J Hendricks, David J Burks, Rajeev K Azad

Methods Mol Biol· July 2024

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RNA-Seq Analysis of Mammalian Prion Disease.
Ambarish Kumar, Jamie Dixson, Rajeev K Azad

Methods Mol Biol· July 2024

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DICEP: An integrative approach to augmenting genomic island detection.
Ronika De, Mehul Jani, Rajeev K Azad

J Biotechnol· June 2024

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Deciphering Microbial Shifts in the Gut and Lung Microbiomes of COVID-19 Patients.
Vaidehi Pusadkar, Anirudh Mazumder, Abhijay Azad, Deepti Patil, Rajeev K Azad

Microorganisms· May 2024

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DiseaseNet: a transfer learning approach to noncommunicable disease classification.
Steven Gore, Bailey Meche, Danyang Shao, Benjamin Ginnett, Kelly Zhou, Rajeev K Azad

BMC Bioinformatics· March 2024

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Benchmarking RNA-Seq Aligners at Base-Level and Junction Base-Level Resolution Using the Genome.
Tallon Coxe, David J Burks, Utkarsh Singh, Ron Mittler, Rajeev K Azad

Plants (Basel)· February 2024

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The OsTIL1 lipocalin protects cell membranes from reactive oxygen species damage and maintains the 18:3-containing glycerolipid biosynthesis under cold stress in rice.
Lingxiao Ji, Zhengfeng Zhang, Shuang Liu, Liyan Zhao, Qiang Li, Rajeev K Azad

Plant J· January 2024

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A gene network-driven approach to infer novel pathogenicity-associated genes: application to PAO1.
Ronika De, Marvin Whiteley, Rajeev K Azad

mSystems· December 2023

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Silicon versus Superbug: Assessing Machine Learning's Role in the Fight against Antimicrobial Resistance.
Tallon Coxe, Rajeev K Azad

Antibiotics (Basel)· November 2023

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Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria.
Fatemah Almalki, Janak Sunuwar, Rajeev K Azad

Microorganisms· November 2023

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Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data.
Vaidehi Pusadkar, Rajeev K Azad

Microorganisms· October 2023

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POSMM: an efficient alignment-free metagenomic profiler that complements alignment-based profiling.
David J Burks, Vaidehi Pusadkar, Rajeev K Azad

Environ Microbiome· March 2023

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Leveraging comparative genomics to uncover alien genes in bacterial genomes.
Soham Sengupta, Rajeev K Azad

Microb Genom· January 2023

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Analysis of multipartite bacterial genomes using alignment free and alignment-based pipelines.
Fatemah Almalki, Madhusudan Choudhary, Rajeev K Azad

Arch Microbiol· December 2022

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Molecular signatures in the progression of COVID-19 severity.
Ronika De, Rajeev K Azad

Sci Rep· December 2022

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Reconstructing horizontal gene flow network to understand prokaryotic evolution.
Soham Sengupta, Rajeev K Azad

Open Biol· November 2022

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