Publications by authors named "Shilin Zhao"

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Gut microbiota composition is associated with SARS-CoV-2 vaccine immunogenicity and adverse events.
Siew C Ng, Ye Peng, Lin Zhang, Chris Kp Mok, Shilin Zhao, Amy Li, Jessica Yl Ching, Yingzhi Liu, Shuai Yan, Dream L S Chan

Gut· June 2022

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A simple and accurate method for lamb traceability based on gas chromatography-ion mobility spectrometry.
Mengjie Qie, Jing Liu, Xiaoting Yang, Shilin Zhao, Yumeng Hu, Yan Zhao

Food Chem· December 2025

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Aconitate Decarboxylase 1 Downregulates Colitis and Maintains Homeostasis of the Gut Metabolome and Microbiome.
Kara M McNamara, Yvonne L Latour, Caroline V Hawkins, Kamery J Williams, Daniel P Barry, Shilin Zhao

Gastro Hep Adv· December 2025

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The mechanism of lncRNA LINC01446 in delayed fracture healing and its clinical significance.
Dawei He, Shilin Zhao, Yaohua Wang, Changhao Liu, Xuming Ding

J Orthop Surg Res· December 2025

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Glo-In-One-v2: holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology.
Lining Yu, Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Shilin Zhao

J Med Imaging (Bellingham)· November 2025

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Img2ST-Net: efficient high-resolution spatial omics prediction from whole-slide histology images via fully convolutional image-to-image learning.
Junchao Zhu, Ruining Deng, Junlin Guo, Tianyuan Yao, Juming Xiong, Shilin Zhao

J Med Imaging (Bellingham)· November 2025

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Evaluating cell AI foundation models in kidney pathology with human-in-the-loop enrichment.
Junlin Guo, Siqi Lu, Can Cui, Ruining Deng, Tianyuan Yao, Shilin Zhao

Commun Med (Lond)· November 2025

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Inflammatory Markers Stratify Surgical Outcomes in Pediatric Airway Reconstruction.
Nomongo Dorjsuren, Hrithik Praveen, Kalpnaben Patel, Shilin Zhao, Alexander Gelbard

Laryngoscope· November 2025

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Distinct and convergent effects of mutations in human breast cancer.
Riley E Bergman, Christin I Keeton, Irika R Sinha, Jonathan P Ling, Yu Wang, Shilin Zhao

Proc Natl Acad Sci U S A· October 2025

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Multiple Drug-Induced Sleep Endoscopy in Pediatric Obstructive Sleep Apnea: Obstruction Patterns and Outcomes.
Daniel R S Habib, Liliana Arida-Moody, Ankita Patro, Jeffanie Wu, Seth Davis, Shilin Zhao

Ann Otol Rhinol Laryngol· October 2025

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Evaluating New AI Cell Foundation Models on Challenging Kidney Pathology Cases Unaddressed by Previous Foundation Models.
Runchen Wang, Junlin Guo, Siqi Lu, Ruining Deng, Zhengyi Lu, Shilin Zhao

ArXiv· October 2025

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Computer Vision Methods for Spatial Transcriptomics: A Survey.
Junchao Zhu, Ruining Deng, Junlin Guo, Tianyuan Yao, Siqi Lu, Shilin Zhao

bioRxiv· October 2025

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Proteomic signatures of pediatric cardiovascular and cardiometabolic traits demonstrate long-term modifiable drivers of adult disease.
Joshua M Landman, Heather M Highland, Andrew S Perry, Annie G Howard, Quanhu Sheng, Shilin Zhao

medRxiv· October 2025

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Genetic analysis in African ancestry populations reveals genetic contributors to lung cancer susceptibility.
Michael J Betti, James Jaworski, Shilin Zhao, J Sunil Rao, Bríd M Ryan

Am J Hum Genet· September 2025

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Machine Learning-Assisted Prediction of Mercury Removal Efficiency of Carbon-Based Adsorbents.
Shilin Zhao, Qi Liu, Yuchen Wang, Lidong Wang, Jun Zhang

Environ Sci Technol· August 2025

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Protective role of epithelial deoxyhypusine synthase in colorectal carcinogenesis caused by deletion of the adenomatous polyposis coli gene.
Alain P Gobert, Caroline V Hawkins, Lydia A Snyder, Kamery J Williams, Daniel P Barry, Shilin Zhao

Cancer Lett· August 2025

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stImage: a versatile framework for optimizing spatial transcriptomic analysis through customizable deep histology and location informed integration.
Yu Wang, Haichun Yang, Ruining Deng, Yuankai Huo, Qi Liu, Shilin Zhao

Brief Bioinform· August 2025

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Human Physiologic Responses to Insulin in Indigenous Americans Identify a Metabolic Susceptibility Profile Linked to Diabetes.
Venkatesh L Murthy, Paolo Piaggi, Phillip Lin, Shilin Zhao, Lindsey K Stolze

Diabetes Care· July 2025

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Preparation of Foamed Ceramic from Cr Slag and MSWI Fly Ash and Its Cr Leaching Inhibition.
Hesong Li, Cheng Liu, Yikun Tang, Shilin Zhao

Materials (Basel)· July 2025

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Beta 2 adrenergic receptor gene methylation activates innate lymphoid cells to drive hypertension in lymphocyte deficient hosts.
Wei Chen, Sara Perrotta, Liang Xiao, Lorenzo Carnevale, Marwa A Abd-ElDayem, Shilin Zhao

Cardiovasc Res· May 2025

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Low-Rank Fine-Tuning Meets Cross-modal Analysis: A Robust Framework for Age-Related Macular Degeneration Categorization.
Baochen Zhen, Yongbin Qi, Zizhen Tang, Chaoyong Liu, Shilin Zhao

J Imaging Inform Med· April 2025

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Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging.
Ruining Deng, Can Cui, Quan Liu, Tianyuan Yao, Lucas W Remedios, Shilin Zhao

IS&T Int Symp Electron Imaging· February 2025

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Assessment of Cell Nuclei AI Foundation Models in Kidney Pathology.
Junlin Guo, Siqi Lu, Can Cui, Ruining Deng, Tianyuan Yao, Shilin Zhao

Proc SPIE Int Soc Opt Eng· February 2025

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GLAM: Glomeruli Segmentation for Human Pathological Lesions using Adapted Mouse Model.
Lining Yu, Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Shilin Zhao

Proc SPIE Int Soc Opt Eng· February 2025

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Cross-Species Data Integration for Enhanced Layer Segmentation in Kidney Pathology.
Junchao Zhu, Mengmeng Yin, Ruining Deng, Yitian Long, Yu Wang, Shilin Zhao

Proc SPIE Int Soc Opt Eng· February 2025

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PySpatial: A High-Speed Whole Slide Image Pathomics Toolkit.
Yuechen Yang, Yu Wang, Tianyuan Yao, Ruining Deng, Mengmeng Yin, Shilin Zhao

IS&T Int Symp Electron Imaging· January 2025

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