Publications by authors named "Stacy A Malaker"

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Small RNAs are modified with N-glycans and displayed on the surface of living cells.
Ryan A Flynn, Kayvon Pedram, Stacy A Malaker, Pedro J Batista, Benjamin A H Smith, Alex G Johnson, Benson M George, Karim Majzoub, Peter W Villalta, Jan E Carette

June 2021

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GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis.
Shane M Finn, Keira E Mahoney, Taryn M Lucas, Valentina Rangel-Angarita, Ryan J Chen, Stacy A Malaker

Anal Chem· November 2025

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An ultrasensitive and modular platform to detect Siglec ligands and control immune cell function.
Zeinab Jame-Chenarboo, Edward N Schmidt, Madeline Crichton, Kei Takahashi-Yamashiro, Guilherme M Lima, Stacy A Malaker

Sci Adv· November 2025

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Region-specific proteomic analysis of aging rhesus macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment strategies for sporadic Alzheimer's disease.
Alexandra D Steigmeyer, Alexandria S Battison, Iris R Liebman, Christopher H van Dyck, Barbara S Slusher, Stacy A Malaker

bioRxiv· November 2025

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Mapping galectin-3 ligands in tear fluid establishes spliceoform-dependent lacritin binding.
Vincent Chang, Isaac Lian, Keira E Mahoney, Jeff Romano, Ali Reza Afshari, Stacy A Malaker

bioRxiv· November 2025

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In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms.
Vincent Chang, Keira E Mahoney, Isaac Lian, Ryan Chen, Nara Chung, Stacy A Malaker

J Biol Chem· September 2025

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Identification of Post-translationally Modified MHC Class I-Associated Peptides as Potential Cancer Immunotherapeutic Targets.
Keira E Mahoney, Larry Reser, Maria Virginia Ruiz Cuevas, Jennifer G Abelin, Jeffrey Shabanowitz, Stacy A Malaker

Mol Cell Proteomics· August 2025

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Small RNAs are modified with N-glycans and displayed on the surface of living cells.
Ryan A Flynn, Kayvon Pedram, Stacy A Malaker, Pedro J Batista, Benjamin A H Smith

Cell· August 2025

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An ultrasensitive and modular platform to detect Siglec ligands and control immune cell function.
Zeinab Jame-Chenarboo, Edward N Schmidt, Madeline Crichton, Kei Takahashi-Yamashiro, Guilherme M Lima, Stacy A Malaker

bioRxiv· June 2025

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In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms.
Vincent Chang, Keira E Mahoney, Isaac Lian, Ryan Chen, Nara Chung, Stacy A Malaker

bioRxiv· June 2025

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Decoding Extracellular Protein Glycosylation in Human Health and Disease.
Alexandra D Steigmeyer, Sarah C Lowery, Valentina Rangel-Angarita, Stacy A Malaker

Annu Rev Anal Chem (Palo Alto Calif)· May 2025

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Glycoproteoforms of Osteoarthritis-associated Lubricin in Plasma and Synovial Fluid.
Ali Reza Afshari, Vincent Chang, Kristina A Thomsson, Jennifer Höglund, Elizabeth N Browne, Stacy A Malaker

Mol Cell Proteomics· March 2025

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PNGaseF-Generated N-Glycans Adduct onto Peptides in the Gas Phase.
Valentina Rangel-Angarita, Joann Chongsaritsinsuk, Keira E Mahoney, Lea M Kim, Ryan J Chen, Stacy A Malaker

J Am Soc Mass Spectrom· March 2025

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Recent Advances in Mass Spectrometry-Based Bottom-Up Proteomics.
Cameron S Movassaghi, Jie Sun, Yuming Jiang, Natalie Turner, Vincent Chang, Stacy A Malaker

Anal Chem· March 2025

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Quantification and Site-Specific Analysis of Co-occupied N- and O-Glycopeptides.
Joann Chongsaritsinsuk, Valentina Rangel-Angarita, Taryn M Lucas, Keira E Mahoney, Olivia M Enny, Stacy A Malaker

J Proteome Res· December 2024

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Unraveling -Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry.
Amanda Helms, Vincent Chang, Stacy A Malaker, Jennifer S Brodbelt

Anal Chem· December 2024

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Expanding the repertoire of GalNAc analogues for cell-specific bioorthogonal tagging of glycoproteins.
Abdul Zafar, Sandhya Sridhar, Ganka Bineva-Todd, Anna Cioce, Nadia Abdulla, Stacy A Malaker

RSC Chem Biol· August 2024

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Stress-induced mucin 13 reductions drive intestinal microbiome shifts and despair behaviors.
Courtney R Rivet-Noor, Andrea R Merchak, Caroline Render, Naudia M Gay, Rebecca M Beiter, Stacy A Malaker

Brain Behav Immun· July 2024

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Analysis of Mucin-Domain Glycoproteins Using Mass Spectrometry.
Keira E Mahoney, Stacy A Malaker

Curr Protoc· July 2024

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Quantification and site-specific analysis of co-occupied N- and O-glycopeptides.
Joann Chongsaritsinsuk, Valentina Rangel-Angarita, Keira E Mahoney, Taryn M Lucas, Olivia M Enny, Stacy A Malaker

bioRxiv· July 2024

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Glycoproteomics: Charting new territory in mass spectrometry and glycobiology.
Stacy A Malaker

J Mass Spectrom· June 2024

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Xylosyltransferase Bump-and-hole Engineering to Chemically Manipulate Proteoglycans in Mammalian Cells.
Zhen Li, Lucia Di Vagno, Himanshi Chawla, Aisling Ni Cheallaigh, Meg Critcher, Stacy A Malaker

bioRxiv· June 2024

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Mass Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe the Mucinome.
Keira E Mahoney, Vincent Chang, Taryn M Lucas, Krystyna Maruszko, Stacy A Malaker

Anal Chem· April 2024

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Optimized mucin-selective enrichment strategy to probe the mucinome.
Keira E Mahoney, Vincent Chang, Taryn M Lucas, Krystyna Maruszko, Stacy A Malaker

bioRxiv· December 2023

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Glycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmE.
Joann Chongsaritsinsuk, Alexandra D Steigmeyer, Keira E Mahoney, Mia A Rosenfeld, Taryn M Lucas, Stacy A Malaker

Nat Commun· October 2023

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False-Positive Glycopeptide Identification via In-FAIMS Fragmentation.
Valentina Rangel-Angarita, Keira E Mahoney, Catherine Kwon, Raibat Sarker, Taryn M Lucas, Stacy A Malaker

JACS Au· September 2023

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