Publications by authors named "Stoeck Thorsten"

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The Basque Coast Estuarine Sediment Gene Catalogue.
Ion L Abad-Recio, Verena Rubel, Sabine Filker, Leire Garate, Thorsten Stoeck

Sci Data· December 2025

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Exploiting taxonomic information from metagenomes to infer bacterial bioindicators and environmental quality at salmon aquaculture installations.
Verena Rubel, Sabine Filker, Anders Lanzén, Ion Luis Abad, Thorsten Stoeck

Mar Pollut Bull· September 2025

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Antimicrobials Shape the Gut Microbiome Structure and Digestive Profile of Invertebrates.
Alexander Feckler, Eric Bollinger, Sven Katzenmeier, Ondrej Adamovsky, Hana Vespalcova, Thorsten Stoeck

Environ Sci Technol· September 2025

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Comparing the precision of two digital PCR applications for copy number comparisons in protists.
Megan Gross, Thorsten Stoeck, Quentin Mauvisseau, Audun Schrøder-Nielsen, Micah Dunthorn

Sci Rep· July 2025

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Using digital PCR to predict ciliate abundance from ribosomal RNA gene copy numbers.
Megan Gross, Micah Dunthorn, Quentin Mauvisseau, Thorsten Stoeck

Environ Microbiol· April 2024

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Simultaneous analysis of seven 16S rRNA hypervariable gene regions increases efficiency in marine bacterial diversity detection.
Kleopatra Leontidou, Ion L Abad-Recio, Verena Rubel, Sabine Filker, Martin Däumer, Thorsten Stoeck

Environ Microbiol· December 2023

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Comparing quantile regression spline analyses and supervised machine learning for environmental quality assessment at coastal marine aquaculture installations.
Kleopatra Leontidou, Verena Rubel, Thorsten Stoeck

PeerJ· June 2023

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Geographic characteristics and environmental variables determine the diversities and assembly of the algal communities in interconnected river-lake system.
Shanghua Wu, Yuzhu Dong, Thorsten Stoeck, Shijie Wang, Haonan Fan

Water Res· April 2023

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Maximising signal-to-noise ratios in environmental DNA-based monitoring.
Thomas A Wilding, Thorsten Stoeck, Barbara J Morrissey, Silvia Ferreira Carvalho, Mark W Coulson

Sci Total Environ· February 2023

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Environmental DNA-based profiling of benthic bacterial and eukaryote communities along a crude oil spill gradient in a coral reef in the Persian Gulf.
Mahshid Oladi, Kleopatra Leontidou, Thorsten Stoeck, Mohammad Reza Shokri

Mar Pollut Bull· November 2022

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Ultrastructure of and new systematic consideration of the euplotid family Uronychiidae (Protista, Ciliophora).
Jingyi Dong, Yujie Liu, Jiyang Ma, Honggang Ma, Thorsten Stoeck

Mar Life Sci Technol· November 2022

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Re-description and molecular phylogeny of the free-swimming peritrichs Hastatella radians Erlanger, 1890 and H. aesculacantha Jarocki & Jakubowska, 1927 (Ciliophora, Peritrichia) from China.
Lele Chen, Yijin Ren, Kun Han, Thorsten Stoeck, Jiamei Jiang

Eur J Protistol· June 2022

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Euplotes huizhouensis nom. nov. (Ciliophora, Euplotida), a replacement name for the junior primary homonym Euplotes tuffraui Lian et al., 2021.
Chunyu Lian, Yurui Wang, Jiamei Jiang, Qingxiang Yuan, Saleh A Al-Farraj, Thorsten Stoeck

Eur J Protistol· April 2022

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Molecular Data Reveal a Cryptic Diversity in the Genus (Alveolata, Ciliophora, Prostomatida), a Key Player in Freshwater Lakes, With Remarks on Morphology, Food Preferences, and Distribution.
Daniela Frantal, Sabine Agatha, Daniela Beisser, Jens Boenigk, Tatyana Darienko, Thorsten Stoeck

Front Microbiol· February 2022

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High salinity gradients and intermediate spatial scales shaped similar biogeographical and co-occurrence patterns of microeukaryotes in a tropical freshwater-saltwater ecosystem.
Changyu Zhu, Weiwei Liu, Xinghao Li, Yusen Xu, Hamed A El-Serehy, Thorsten Stoeck

Environ Microbiol· February 2022

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Comparing sediment preservation methods for genomic biomonitoring of coastal marine ecosystems.
Verena Dully, Giulia Rech, Thomas A Wilding, Anders Lanzén, Kate MacKichan, Thorsten Stoeck

Mar Pollut Bull· December 2021

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High salinity gradients and intermediate spatial scales shaped similar biogeographical and co-occurrence patterns of microeukaryotes in a tropical freshwater-saltwater ecosystem.
Changyu Zhu, Weiwei Liu, Xinghao Li, Yusen Xu, Hamed A El-Serehy, Thorsten Stoeck

Environ Microbiol· August 2021

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Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap.
Tristan Cordier, Laura Alonso-Sáez, Laure Apothéloz-Perret-Gentil, Eva Aylagas, David A Bohan, Thorsten Stoeck

Mol Ecol· July 2021

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Global Trends of Benthic Bacterial Diversity and Community Composition Along Organic Enrichment Gradients of Salmon Farms.
Larissa Frühe, Verena Dully, Dominik Forster, Nigel B Keeley, Olivier Laroche, Thorsten Stoeck

Front Microbiol· April 2021

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Identifying the minimum amplicon sequence depth to adequately predict classes in eDNA-based marine biomonitoring using supervised machine learning.
Verena Dully, Thomas A Wilding, Timo Mühlhaus, Thorsten Stoeck

Comput Struct Biotechnol J· April 2021

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An integrative approach sheds new light onto the systematics and ecology of the widespread ciliate genus Coleps (Ciliophora, Prostomatea).
Thomas Pröschold, Daniel Rieser, Tatyana Darienko, Laura Nachbaur, Barbara Kammerlander, Thorsten Stoeck

Sci Rep· March 2021

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Lake Ecosystem Robustness and Resilience Inferred from a Climate-Stressed Protistan Plankton Network.
Dominik Forster, Zhishuai Qu, Gianna Pitsch, Estelle P Bruni, Barbara Kammerlander, Thorsten Stoeck

Microorganisms· March 2021

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Aquatic food webs in deep temperate lakes: Key species establish through their autecological versatility.
Zhishuai Qu, Dominik Forster, Estelle P Bruni, Daniela Frantal, Barbara Kammerlander, Thorsten Stoeck

Mol Ecol· February 2021

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Report of the 2020 meeting of the German Society for Protozoology.
Sabine Filker, Thorsten Stoeck

Eur J Protistol· August 2020

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Morphological, Phylogenetic and Ecophysiological Characterization of a New Ciliate, Platynematum rossellomorai n. sp. (Oligohymenophorea, Scuticociliatia), Detected in a Hypersaline Pond on Mallorca, Spain.
Zhishuai Qu, Lea Weinisch, Xinpeng Fan, Sven Katzenmeier, Thorsten Stoeck

Protist· August 2020

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