Publications by authors named "Szi-chieh Yu"

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Neuronal wiring diagram of an adult brain.
Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Philipp Schlegel, Szi-Chieh Yu, Claire E McKellar, Albert Lin, Marta Costa, Katharina Eichler, Yijie Yin

Nature· October 2024

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The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex.
Agnes L Bodor, Casey M Schneider-Mizell, Chi Zhang, Leila Elabbady, Alex Mallen, Szi-Chieh Yu

Nat Neurosci· August 2025

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Distributed control circuits across a brain-and-cord connectome.
Alexander Shakeel Bates, Jasper S Phelps, Minsu Kim, Helen H Yang, Arie Matsliah, Yunzhi Zhao, Szi-Chieh Yu

bioRxiv· August 2025

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Comparative connectomics of Drosophila descending and ascending neurons.
Tomke Stürner, Paul Brooks, Laia Serratosa Capdevila, Billy J Morris, Alexandre Javier, Szi-Chieh Yu

Nature· July 2025

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Connectomic reconstruction from hippocampal CA3 reveals spatially graded mossy fiber inputs and selective feedforward inhibition to pyramidal cells.
Zhihao Zheng, Changjoo Park, Eric W Hammerschmith, Ran Lu, Szi-Chieh Yu

bioRxiv· July 2025

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Sexually-dimorphic neurons in the whole-brain connectome.
David Deutsch, Arie Matsliah, Kaiyu Wang, Sven Dorkenwald, Arpita Mondal, Szi-Chieh Yu

bioRxiv· June 2025

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Sexually-dimorphic neurons in the whole-brain connectome.
David Deutsch, Arie Matsliah, Kaiyu Wang, Sven Dorkenwald, Arpita Mondal, Szi-Chieh Yu

Res Sq· June 2025

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CAVE: Connectome Annotation Versioning Engine.
Sven Dorkenwald, Casey M Schneider-Mizell, Derrick Brittain, Akhilesh Halageri, Chris Jordan, Szi-Chieh Yu

Nat Methods· May 2025

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An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex.
Marissa A Weis, Stelios Papadopoulos, Laura Hansel, Timo Lüddecke, Brendan Celii, Szi-Chieh Yu

Nat Commun· April 2025

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NEURD offers automated proofreading and feature extraction for connectomics.
Brendan Celii, Stelios Papadopoulos, Zhuokun Ding, Paul G Fahey, Eric Wang, Szi-Chieh Yu

Nature· April 2025

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Connectomics of predicted Sst transcriptomic types in mouse visual cortex.
Clare R Gamlin, Casey M Schneider-Mizell, Matthew Mallory, Leila Elabbady, Nathan Gouwens, Szi-Chieh Yu

Nature· April 2025

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Functional connectomics reveals general wiring rule in mouse visual cortex.
Zhuokun Ding, Paul G Fahey, Stelios Papadopoulos, Eric Y Wang, Brendan Celii, Szi-Chieh Yu

Nature· April 2025

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Perisomatic ultrastructure efficiently classifies cells in mouse cortex.
Leila Elabbady, Sharmishtaa Seshamani, Shang Mu, Gayathri Mahalingam, Casey M Schneider-Mizell, Szi-Chieh Yu

Nature· April 2025

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A Drosophila computational brain model reveals sensorimotor processing.
Philip K Shiu, Gabriella R Sterne, Nico Spiller, Romain Franconville, Andrea Sandoval, Chan Hyuk Kang, Seongbong Yu, Szi-Chieh Yu

Nature· October 2024

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Whole-brain annotation and multi-connectome cell typing of Drosophila.
Philipp Schlegel, Yijie Yin, Alexander S Bates, Sven Dorkenwald, Katharina Eichler, Szi-Chieh Yu

Nature· October 2024

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Neuronal parts list and wiring diagram for a visual system.
Arie Matsliah, Szi-Chieh Yu, Krzysztof Kruk, Doug Bland, Austin T Burke

Nature· October 2024

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The fly connectome reveals a path to the effectome.
Dean A Pospisil, Max J Aragon, Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Szi-Chieh Yu

Nature· October 2024

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Network statistics of the whole-brain connectome of Drosophila.
Albert Lin, Runzhe Yang, Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Szi-Chieh Yu

Nature· October 2024

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RIM and RIM-Binding Protein Localize Synaptic CaV2 Channels to Differentially Regulate Transmission in Neuronal Circuits.
Barbara Jánosi, Jana F Liewald, Marius Seidenthal, Szi-Chieh Yu, Simon Umbach

J Neurosci· July 2024

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Comparative connectomics of the descending and ascending neurons of the nervous system: stereotypy and sexual dimorphism.
Tomke Stürner, Paul Brooks, Laia Serratosa Capdevila, Billy J Morris, Alexandre Javier, Szi-Chieh Yu

bioRxiv· June 2024

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Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster.
Nils Eckstein, Alexander Shakeel Bates, Andrew Champion, Michelle Du, Yijie Yin, Szi-Chieh Yu

Cell· May 2024

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Neuronal "parts list" and wiring diagram for a visual system.
Arie Matsliah, Szi-Chieh Yu, Krzysztof Kruk, Doug Bland, Austin Burke

bioRxiv· April 2024

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Network Statistics of the Whole-Brain Connectome of .
Albert Lin, Runzhe Yang, Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Szi-Chieh Yu

bioRxiv· February 2024

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From connectome to effectome: learning the causal interaction map of the fly brain.
Dean A Pospisil, Max J Aragon, Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Szi-Chieh Yu

bioRxiv· February 2024

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CAVE: Connectome Annotation Versioning Engine.
Sven Dorkenwald, Casey M Schneider-Mizell, Derrick Brittain, Akhilesh Halageri, Chris Jordan, Szi-Chieh Yu

bioRxiv· July 2023

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