Publications by authors named "Taane Clark"

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Genomic insights into pyrazinamide and fluoroquinolone resistance in multidrug-resistant tuberculosis in Khyber Pakhtunkhwa, Pakistan.
Zia Ud Din, Farman Ullah, Anwar Sheed Khan, Sajjad Ahmad, Azra, Taane G Clark

Int J Med Microbiol· December 2025

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Emergence of novel sublineages of Mycobacterium tuberculosis in Pakistan.
Muhammad Tahir Khan, Chendi Zhu, Arwa Omar Al Khatib, Dalal Sulaiman Alshaya, Ahmed A Al-Qahtani, Taane G Clark

Int J Med Microbiol· December 2025

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Genome-wide analysis of genetic diversity in Anopheles darlingi from Rondônia State, Brazil.
Sophie Moss, Holly Acford-Palmer, Alice O Andrade, Emilia Manko, Jody Phelan, Taane G Clark

Commun Biol· December 2025

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Comparative genomic insights into multidrug resistance in classical and hypervirulent K. pneumoniae clinical isolates.
Azra, Ihsan Ullah, Woranich Hinthong, Jody E Phelan, Susana Campino, Taane G Clark

Sci Rep· December 2025

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Novel zoonotic cases of Plasmodium simium from São Paulo with a reference genome of the Brazilian strain.
Emilia Manko, Nina Billows, Matthew Higgins, Daniel Ward, Amy Ibrahim, Taane G Clark

Sci Rep· December 2025

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Enhancing whole genome DNA amplification of Plasmodium falciparum for advanced molecular surveillance in malaria control.
Mark K I Tan, Myrela C S de Jesus, Jody E Phelan, Joseph Thorpe, Daniel Ward, Taane G Clark

Malar J· December 2025

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Genome-wide analysis and longitudinal study of Klebsiella pneumoniae in Portugal: Tracing the evolution and spread of carbapenem resistance.
Rita Elias, Jody E Phelan, Luís Lito, Cátia Caneiras, Cátia Marques, Taane G Clark

Int J Antimicrob Agents· November 2025

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Genomic insights into persistent infections, reinfections, and subspecies diversity of Mycobacteroides abscessus: A whole-genome sequencing study of Thai and global isolates.
Kanwara Trisakul, Auttawit Sirichoat, Arnone Nithichanon, Suwatchareeporn Rotcheewaphan, Jody Phelan, Taane G Clark

Infect Genet Evol· November 2025

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Long short-term memory-based deep learning model for the discovery of antimicrobial peptides targeting .
Linfeng Wang, Susana Campino, Taane G Clark, Jody E Phelan

Bioinform Adv· November 2025

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TOAST: a novel tool for designing targeted gene amplicons and an optimised set of primers for high-throughput sequencing in tuberculosis genomic studies.
Linfeng Wang, Naphatcha Thawong, Joseph Thorpe, Matthew Higgins, Mark Tan Kia Ik, Taane G Clark

BMC Genomics· November 2025

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Genetic insights into antimicrobial resistance and virulence characteristics of Salmonella enterica isolated from Nile tilapia sourced from retail markets in Thailand.
Justice Opare Odoi, Saran Anuntawirun, Nawaphorn Roongrojmongkhon, Worapong Singchat, Thitipong Panthum, Taane G Clark

BMC Microbiol· November 2025

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The role of cytochrome bc inhibitors in future tuberculosis treatment regimens.
Clara Aguilar-Pérez, Anne J Lenaerts, Cristina Villellas, Jerome Guillemont, John Dallow, Taane G Clark

Nat Commun· October 2025

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Whole-genome sequencing analysis of Burkholderia pseudomallei comparing drug-resistant and pan-susceptible isolates reveals novel biomarkers for drug resistance.
Yothin Hinwan, Nut Nithimongkolchai, Kanwara Trisakul, Benjawan Kaewseekhao, Lumyai Wonglakorn, Taane G Clark

Infect Genet Evol· September 2025

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Genomic insights into Klebsiella pneumoniae: Virulence, resistance, and transmission in South and Southeast Asia.
Woranich Hinthong, Jody Phelan, Arif Hussain, Razib Mazumder, Azra, Taane G Clark

Int J Med Microbiol· September 2025

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A timeline of reckoning: Tracking the historical rise of antimicrobial resistance across HIV, TB, and malaria.
Tayla Williamson, Jack Adderley, Kylie Quinn, Taane G Clark, Sharon R Lewin

J Glob Antimicrob Resist· September 2025

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Whole-Genome Sequencing Analysis of Drug-Resistant in Children.
Muhammad Riaz, Shabir Ahmad, Fazal Sattar, Ganwu Li, Zia Ud Din, Taane G Clark

Pathogens· September 2025

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Genomic decoding of drug-resistant tuberculosis transmission in Thailand over three decades.
Naphatcha Thawong, Prapaporn Srilohasin, Jody E Phelan, Worawich Phornsiricharoenphant, Sissades Tongsima, Taane G Clark

Sci Rep· August 2025

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Highly conserved genomes in Duffy-negative individuals from Sudan.
Regan E Schroeder, Safaa Ahmed, Anthony Ford, Mohammed Elfaki, Samuel Omer Hamad, Taane G Clark

Res Sq· August 2025

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Complete and draft genome sequences of clinical isolates from the Philippines.
Saul M Rojas, Ma Angelica A Tujan, Angela Kae C Valencia, Jessel Babe G Capin, Timothy John R Dizon, Taane G Clark

Microbiol Resour Announc· July 2025

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Rapid detection of antibiotic resistance in Burkholderia pseudomallei using MALDI-TOF mass spectrometry.
Nut Nithimongkolchai, Yothin Hinwan, Kanwara Trisakul, Lumyai Wonglakorn, Ploenchan Chetchotisakd, Taane G Clark

Sci Rep· July 2025

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PPE50 variants as novel phylogeographic signatures of host-pathogen co-evolution in tuberculosis.
Christopher D'Souza, Jody E Phelan, Paula-Josefina Gomez-Gonzalez, Joseph Thorpe, Taane G Clark

Commun Biol· July 2025

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Profiling insecticide resistance phenotypes and genotypes in Aedes aegypti populations across four regions in Puerto Rico.
Emma L Collins, Joanelis Medina Quintana, Reynaldo Morales, Sophie Moss, Holly Acford-Palmer, Taane G Clark

Sci Rep· July 2025

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The c-54t compensatory mutation is not always a valid surrogate for isoniazid resistance in .
Viktória Szél, Jody E Phelan, Sophia B Georghiou, David L Dolinger, Taane G Clark

Antimicrob Agents Chemother· June 2025

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Gametocyte production and transmission fitness of African and Asian isolates with differential susceptibility to artemisinins.
Nicholas I Proellochs, Chiara Andolina, Jordache Ramjith, Rianne Stoter, Geert-Jan van Gemert, Taane G Clark

Antimicrob Agents Chemother· June 2025

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Genome wide population genetics and molecular surveillance of insecticide resistance in Anopheles stephensi mosquitoes from Awash Sebat Kilo in Ethiopia.
Holly Acford-Palmer, Fitsum G Tadesse, Emilia Manko, Jody E Phelan, Matthew Higgins, Taane G Clark

Sci Rep· May 2025

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