Publications by authors named "Tami D Lieberman"

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Spatiotemporal microbial evolution on antibiotic landscapes.
Michael Baym, Tami D Lieberman, Eric D Kelsic, Remy Chait, Rotem Gross, Idan Yelin, Roy Kishony

Science· September 2016

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Phage-mediated lysis does not determine colonization on human skin.
A Delphine Tripp, Evan B Qu, Ishaq Balogun, Julia Brodsky, Jacob S Baker, Tami D Lieberman

bioRxiv· September 2025

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High-accuracy SNV calling for bacterial isolates using deep learning with AccuSNV.
Herui Liao, Arolyn Conwill, Ian Light-Maka, Martin Fenk, Alyssa H Mitchell, Tami D Lieberman

bioRxiv· September 2025

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Intraspecies associations from strain-rich metagenome samples.
Evan B Qu, Jacob S Baker, Laura Markey, Veda Khadka, Chris Mancuso, Tami D Lieberman

Cell Rep· August 2025

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Intraspecies warfare restricts strain coexistence in human skin microbiomes.
Christopher P Mancuso, Jacob S Baker, Evan B Qu, A Delphine Tripp, Ishaq O Balogun, Tami D Lieberman

Nat Microbiol· July 2025

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De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen.
Alexandra J Poret, Matthew Schaefers, Christina Merakou, Kathryn E Mansour, Connor D Ahern, Tami D Lieberman

Nat Commun· July 2025

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The microbiome of the human facial skin is unique compared to that of other hominids.
Samuel Degregori, Melissa B Manus, Evan B Qu, Calen P Mendall, Jacob S Baker, Tami D Lieberman

mSystems· June 2025

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Microbiome diversity of low biomass skin sites is captured by metagenomics but not 16S amplicon sequencing.
Laura Markey, Evan B Qu, Calen Mendall, Ana Finzel, Arne Materna, Tami D Lieberman

bioRxiv· June 2025

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Intraspecies dynamics underlie the apparent stability of two important skin microbiome species.
Jacob S Baker, Evan Qu, Christopher P Mancuso, A Delphine Tripp, Arolyn Conwill, Tami D Lieberman

Cell Host Microbe· May 2025

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Mixing microbiomes in vitro reveals rules of community assembly.
Alyssa H Mitchell, Tami D Lieberman

Proc Natl Acad Sci U S A· April 2025

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Intraspecies warfare restricts strain coexistence in human skin microbiomes.
Christopher P Mancuso, Jacob S Baker, Evan Qu, A Delphine Tripp, Ishaq O Balogun, Tami D Lieberman

bioRxiv· March 2025

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Intraspecies associations from strain-rich metagenome samples.
Evan B Qu, Jacob S Baker, Laura Markey, Veda Khadka, Chris Mancuso, Tami D Lieberman

bioRxiv· February 2025

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Previously hidden intraspecies dynamics underlie the apparent stability of two important skin microbiome species.
Jacob S Baker, Evan Qu, Christopher P Mancuso, A Delphine Tripp, Arolyn Conwill, Tami D Lieberman

bioRxiv· January 2025

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Commensal Skin Bacteria Exacerbate Inflammation and Delay Skin Barrier Repair.
Veda D Khadka, Laura Markey, Magalie Boucher, Tami D Lieberman

J Invest Dermatol· November 2024

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Reversions mask the contribution of adaptive evolution in microbiomes.
Paul A Torrillo, Tami D Lieberman

Elife· September 2024

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Reversions mask the contribution of adaptive evolution in microbiomes.
Paul A Torrillo, Tami D Lieberman

bioRxiv· June 2024

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mutations mediate phenotypic switching in an opportunistic human lung pathogen.
Alexandra J Poret, Matthew Schaefers, Christina Merakou, Kathryn E Mansour, Georgia K Lagoudas, Tami D Lieberman

bioRxiv· February 2024

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Commensal skin bacteria exacerbate inflammation and delay skin healing.
Veda D Khadka, Laura Markey, Magalie Boucher, Tami D Lieberman

bioRxiv· December 2023

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On-person adaptive evolution of Staphylococcus aureus during treatment for atopic dermatitis.
Felix M Key, Veda D Khadka, Carolina Romo-González, Kimbria J Blake, Liwen Deng, Tami D Lieberman

Cell Host Microbe· April 2023

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Insufficient evidence for non-neutrality of synonymous mutations.
Leonid Kruglyak, Andreas Beyer, Joshua S Bloom, Jan Grossbach, Tami D Lieberman

Nature· April 2023

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Cutaneous Surgical Wounds Have Distinct Microbiomes from Intact Skin.
Sameer Gupta, Alexandra J Poret, David Hashemi, Amarachi Eseonu, Sherry H Yu, Tami D Lieberman

Microbiol Spectr· February 2023

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Detecting bacterial adaptation within individual microbiomes.
Tami D Lieberman

Philos Trans R Soc Lond B Biol Sci· October 2022

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Anatomy promotes neutral coexistence of strains in the human skin microbiome.
Arolyn Conwill, Anne C Kuan, Ravalika Damerla, Alexandra J Poret, Jacob S Baker, Tami D Lieberman

Cell Host Microbe· February 2022

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The Skin Microbiome of Patients With Atopic Dermatitis Normalizes Gradually During Treatment.
Veda D Khadka, Felix M Key, Carolina Romo-González, Adrián Martínez-Gayosso, Blanca L Campos-Cabrera, Tami D Lieberman

Front Cell Infect Microbiol· October 2021

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Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events.
Jacob E Lemieux, Katherine J Siddle, Bennett M Shaw, Christine Loreth, Stephen F Schaffner, Tami D Lieberman

Science· February 2021

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Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events.
Jacob E Lemieux, Katherine J Siddle, Bennett M Shaw, Christine Loreth, Stephen F Schaffner, Tami D Lieberman

medRxiv· August 2020

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