Publications by authors named "Tyler A Joseph"

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Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia.
Joseph H Marcus, Cosimo Posth, Harald Ringbauer, Luca Lai, Robin Skeates, Carlo Sidore, Jessica Beckett, Anja Furtwängler, Anna Olivieri, Charleston W K Chiang

February 2020

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Computationally efficient meta-analysis of gene-based tests using summary statistics in large-scale genetic studies.
Tyler A Joseph, Joelle Mbatchou, Arkopravo Ghosh, Anthony Marcketta, Christopher E Gillies

Nat Genet· December 2025

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Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reveals personalized growth rates.
Tyler A Joseph, Philippe Chlenski, Aviya Litman, Tal Korem, Itsik Pe'er

Genome Res· March 2022

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Directional Gaussian Mixture Models of the Gut Microbiome Elucidate Microbial Spatial Structure.
Amey P Pasarkar, Tyler A Joseph, Itsik Pe'er

mSystems· December 2021

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An Introduction to Whole-Metagenome Shotgun Sequencing Studies.
Tyler A Joseph, Itsik Pe'er

Methods Mol Biol· April 2021

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Efficient and Accurate Inference of Mixed Microbial Population Trajectories from Longitudinal Count Data.
Tyler A Joseph, Amey P Pasarkar, Itsik Pe'er

Cell Syst· June 2020

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Compositional Lotka-Volterra describes microbial dynamics in the simplex.
Tyler A Joseph, Liat Shenhav, Joao B Xavier, Eran Halperin, Itsik Pe'er

PLoS Comput Biol· May 2020

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Inference of Population Structure from Time-Series Genotype Data.
Tyler A Joseph, Itsik Pe'er

Am J Hum Genet· August 2019

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FEAST: fast expectation-maximization for microbial source tracking.
Liat Shenhav, Mike Thompson, Tyler A Joseph, Leah Briscoe, Ori Furman

Nat Methods· July 2019

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Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles.
Terrence C Demos, Julian C Kerbis Peterhans, Tyler A Joseph, John D Robinson, Bernard Agwanda

PLoS One· June 2016

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