Publications by authors named "Victor Greiff"

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Unlocking protein-based biomarker potential for graft-versus-host disease following allogenic hematopoietic stem cell transplants.
Maria Iacobescu, Cristina Pop, Alina Uifălean, Cristina Mogoşan, Diana Cenariu, Mihnea Zdrenghea, Alina Tănase, Jon Thor Bergthorsson, Victor Greiff, Mihai Cenariu

Front Immunol· March 2024

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YAbS: The Antibody Society's antibody therapeutics database.
Puneet Rawat, Silvia Crescioli, R Prabakaran, Divya Sharma, Victor Greiff

MAbs· December 2025

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Systematic benchmarking of mass spectrometry-based antibody sequencing reveals methodological biases.
Maria Chernigovskaya, Khang Lê Quý, Maria Stensland, Sachin Singh, Rowan Nelson, Victor Greiff

Cell Syst· November 2025

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Investigating Local Sequence-Structural Attributes of Amyloidogenic Light Chain Variable Domains.
Puneet Rawat, R Prabakaran, Divya Sharma, Vasanth Mandala, Victor Greiff

Proteins· September 2025

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Pan-carcinoma sialyl-Tn-targeting expands CAR therapy to solid tumors.
Rafaela Abrantes, Christopher Forcados, David J Warren, Liliana Santos-Ferreira, Karianne Giller Fleten, Victor Greiff

Cell Rep Med· September 2025

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TCR2HLA: calibrated inference of HLA genotypes from TCR repertoires enables identification of immunologically relevant metaclonotypes.
Koshlan Mayer-Blackwell, Anastasia Minervina, Mikhail Pogorelyy, Puneet Rawat, Melanie R Shapiro, Victor Greiff

bioRxiv· July 2025

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Applying computational protein design to therapeutic antibody discovery - current state and perspectives.
Weronika Bielska, Igor Jaszczyszyn, Pawel Dudzic, Bartosz Janusz, Dawid Chomicz, Victor Greiff

Front Immunol· June 2025

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High-resolution mapping of cell cycle dynamics during steady-state T cell development and regeneration in vivo.
Heike Kunze-Schumacher, Nikita A Verheyden, Zoe Grewers, Michael Meyer-Hermann, Victor Greiff

Cell Rep· January 2025

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Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning.
Maria Chernigovskaya, Milena Pavlović, Chakravarthi Kanduri, Sofie Gielis, Philippe A Robert, Victor Greiff

Nucleic Acids Res· January 2025

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Publisher Correction: The dengue-specific immune response and antibody identification with machine learning.
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone

NPJ Vaccines· December 2024

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Reading the repertoire: Progress in adaptive immune receptor analysis using machine learning.
Timothy J O'Donnell, Chakravarthi Kanduri, Giulio Isacchini, Julien P Limenitakis, Rebecca A Brachman, Victor Greiff

Cell Syst· December 2024

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Assessing AF2's ability to predict structural ensembles of proteins.
Jakob R Riccabona, Fabian C Spoendlin, Anna-Lena M Fischer, Johannes R Loeffler, Patrick K Quoika, Victor Greiff

Structure· November 2024

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Predictability of antigen binding based on short motifs in the antibody CDRH3.
Lonneke Scheffer, Eric Emanuel Reber, Brij Bhushan Mehta, Milena Pavlović, Maria Chernigovskaya, Victor Greiff

Brief Bioinform· September 2024

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Best practices for machine learning in antibody discovery and development.
Leonard Wossnig, Norbert Furtmann, Andrew Buchanan, Sandeep Kumar, Victor Greiff

Drug Discov Today· July 2024

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MHC heterozygosity limits T cell receptor variability in CD4 T cells.
Alexander J Brown, Janice White, Laura Shaw, Jimmy Gross, Andrei Slabodkin, Victor Greiff

Sci Immunol· July 2024

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Benchmarking and integrating human B-cell receptor genomic and antibody proteomic profiling.
Khang Lê Quý, Maria Chernigovskaya, Maria Stensland, Sachin Singh, Jinwoo Leem, Victor Greiff

NPJ Syst Biol Appl· July 2024

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Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability.
Habib Bashour, Eva Smorodina, Matteo Pariset, Jahn Zhong, Rahmad Akbar, Victor Greiff

Commun Biol· July 2024

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Linguistics-based formalization of the antibody language as a basis for antibody language models.
Mai Ha Vu, Philippe A Robert, Rahmad Akbar, Bartlomiej Swiatczak, Geir Kjetil Sandve, Victor Greiff

Nat Comput Sci· June 2024

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Author Correction: Insights into next generation sequencing guided antibody selection strategies.
M Frank Erasmus, Fortunato Ferrara, Sara D'Angelo, Laura Spector, Camila Leal-Lopes, Victor Greiff

Sci Rep· February 2024

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Systematic evaluation of B-cell clonal family inference approaches.
Daria Balashova, Barbera D C van Schaik, Maria Stratigopoulou, Jeroen E J Guikema, Tom G Caniels, Victor Greiff

BMC Immunol· February 2024

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Author Correction: The dengue-specific immune response and antibody identification with machine learning.
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone

NPJ Vaccines· February 2024

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ExpoSeq: simplified analysis of high-throughput sequencing data from antibody discovery campaigns.
Christoffer V Sørensen, Nils Hofmann, Puneet Rawat, Frederik V Sørensen, Anne Ljungars, Victor Greiff

Bioinform Adv· February 2024

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Corrigendum: Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence.
Lorenzo Federico, Brandon Malone, Simen Tennøe, Viktoriia Chaban, Julie Røkke Osen, Victor Greiff

Front Immunol· February 2024

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The dengue-specific immune response and antibody identification with machine learning.
Eriberto Noel Natali, Alexander Horst, Patrick Meier, Victor Greiff, Mario Nuvolone

NPJ Vaccines· January 2024

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Author Correction: Insights into next generation sequencing guided antibody selection strategies.
M Frank Erasmus, Fortunato Ferrara, Sara D'Angelo, Laura Spector, Camila Leal-Lopes, Victor Greiff

Sci Rep· December 2023

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