Publications by authors named "Vincent Denef"

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Dissecting two contrasting phytoplankton-symbiont interaction modes based on population dynamics and gene expression patterns.
Jinny Wu Yang, Vincent J Denef

mSystems· December 2025

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Tracking putative viruses and virus-host associations across distinct phases of a -dominated bloom.
A J Wing, Bridget Hegarty, G Eric Bastien, Vincent J Denef, Jacob Evans

mSystems· October 2025

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Comparative genomic analysis of Microcystis strain diversity using conserved marker genes.
E Anders Kiledal, Laura A Reitz, Esmée Q Kuiper, Jacob Evans, Ruqaiya Siddiqui, Vincent J Denef

Harmful Algae· February 2024

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Dissecting host-microbiome interaction effects on phytoplankton microbiome composition and diversity.
Jinny Wu Yang, Vincent J Denef

Environ Microbiol· February 2024

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Variation in resource competition traits among strains is affected by their microbiomes.
Dylan Baker, Casey M Godwin, Muhtamim Khanam, Ashley M Burtner, Gregory J Dick, Vincent J Denef

mLife· December 2023

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The Western Lake Erie culture collection: A promising resource for evaluating the physiological and genetic diversity of Microcystis and its associated microbiome.
Colleen E Yancey, E Anders Kiledal, Subba Rao Chaganti, Vincent J Denef, Reagan M Errera

Harmful Algae· July 2023

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Impacts of an invasive filter-feeder on bacterial biodiversity are context dependent.
Nikesh Dahal, Paul Glyshaw, Glenn Carter, Henry A Vanderploeg, Vincent J Denef

FEMS Microbiol Ecol· December 2022

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Effects of Phycosphere Bacteria on Their Algal Host Are Host Species-Specific and Not Phylogenetically Conserved.
Dylan Baker, James Lauer, Anna Ortega, Sara L Jackrel, Vincent J Denef

Microorganisms· December 2022

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The genetic and ecophysiological diversity of Microcystis.
Gregory J Dick, Melissa B Duhaime, Jacob T Evans, Reagan M Errera, Casey M Godwin, Vincent J Denef

Environ Microbiol· December 2021

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Host specificity of microbiome assembly and its fitness effects in phytoplankton.
Sara L Jackrel, Jinny W Yang, Kathryn C Schmidt, Vincent J Denef

ISME J· March 2021

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Genotype and host microbiome alter competitive interactions between Microcystis aeruginosa and Chlorella sorokiniana.
Kathryn C Schmidt, Sara L Jackrel, Derek J Smith, Gregory J Dick, Vincent J Denef

Harmful Algae· November 2020

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Correction for Props et al., "Gene Expansion and Positive Selection as Bacterial Adaptations to Oligotrophic Conditions".
Ruben Props, Pieter Monsieurs, Peter Vandamme, Natalie Leys, Vincent J Denef

mSphere· November 2020

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Temperature and Nutrient Levels Correspond with Lineage-Specific Microdiversification in the Ubiquitous and Abundant Freshwater Genus .
Ruben Props, Vincent J Denef

Appl Environ Microbiol· May 2020

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To Dereplicate or Not To Dereplicate?
Jacob T Evans, Vincent J Denef

mSphere· May 2020

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Microhabitats are associated with diversity-productivity relationships in freshwater bacterial communities.
Marian L Schmidt, Bopaiah A Biddanda, Anthony D Weinke, Edna Chiang, Fallon Januska, Vincent J Denef

FEMS Microbiol Ecol· April 2020

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Giant virus diversity and host interactions through global metagenomics.
Frederik Schulz, Simon Roux, David Paez-Espino, Sean Jungbluth, David A Walsh, Vincent J Denef

Nature· February 2020

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Microbiomes Reduce Their Host's Sensitivity to Interspecific Interactions.
Sara L Jackrel, Kathryn C Schmidt, Bradley J Cardinale, Vincent J Denef

mBio· January 2020

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Genome evolution and host-microbiome shifts correspond with intraspecific niche divergence within harmful algal bloom-forming Microcystis aeruginosa.
Sara L Jackrel, Jeffrey D White, Jacob T Evans, Kyle Buffin, Kristen Hayden, Vincent J Denef

Mol Ecol· September 2019

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Randomized Lasso Links Microbial Taxa with Aquatic Functional Groups Inferred from Flow Cytometry.
Peter Rubbens, Marian L Schmidt, Ruben Props, Bopaiah A Biddanda, Nico Boon, Vincent J Denef

mSystems· September 2019

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Gene Expansion and Positive Selection as Bacterial Adaptations to Oligotrophic Conditions.
Ruben Props, Pieter Monsieurs, Peter Vandamme, Natalie Leys, Vincent J Denef

mSphere· February 2019

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Correction: Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats.
Edna Chiang, Marian L Schmidt, Michelle A Berry, Bopaiah A Biddanda, Ashley Burtner, Vincent J Denef

PLoS One· October 2018

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Ecological Engineering Helps Maximize Function in Algal Oil Production.
Sara L Jackrel, Anita Narwani, Bastian Bentlage, Robert B Levine, David C Hietala, Vincent J Denef

Appl Environ Microbiol· August 2018

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Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats.
Edna Chiang, Marian L Schmidt, Michelle A Berry, Bopaiah A Biddanda, Ashley Burtner, Vincent J Denef

PLoS One· July 2018

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Flow cytometric monitoring of bacterioplankton phenotypic diversity predicts high population-specific feeding rates by invasive dreissenid mussels.
Ruben Props, Marian L Schmidt, Jasmine Heyse, Henry A Vanderploeg, Nico Boon, Vincent J Denef

Environ Microbiol· February 2018

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Genome sequences of lower Great Lakes Microcystis sp. reveal strain-specific genes that are present and expressed in western Lake Erie blooms.
Kevin Anthony Meyer, Timothy W Davis, Susan B Watson, Vincent J Denef, Michelle A Berry

PLoS One· October 2017

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