Publications by authors named "Warren Johnson"

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Genomic legacy of the African cheetah, Acinonyx jubatus.
Pavel Dobrynin, Shiping Liu, Gaik Tamazian, Zijun Xiong, Andrey A Yurchenko, Ksenia Krasheninnikova, Sergey Kliver, Anne Schmidt-Küntzel, Klaus-Peter Koepfli, Warren Johnson

Genome Biol· December 2015

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Best-practice guidance for Earth BioGenome Project sample collection and processing: progress and challenges in biodiverse reference genome creation.
Mara K N Lawniczak, Kevin M Kocot, Jonas J Astrin, Mark Blaxter, Cibele G Sotero-Caio, Warren E Johnson

Gigascience· January 2025

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Multi-generational benefits of genetic rescue.
Dave P Onorato, Mark W Cunningham, Mark Lotz, Marc Criffield, David Shindle, Annette Johnson, Warren E Johnson

Sci Rep· July 2024

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History of Diversification and Adaptation from North to South Revealed by Genomic Data: Guanacos from the Desert to Sub-Antarctica.
Fabiola León, Eduardo J Pizarro, Daly Noll, Luis R Pertierra, Benito A Gonzalez, Warren E Johnson

Genome Biol Evol· May 2024

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Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes).
Sergei Kliver, Marlys L Houck, Polina L Perelman, Azamat Totikov, Andrey Tomarovsky, Warren E Johnson

J Hered· August 2023

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Whole genome analysis of clouded leopard species reveals an ancient divergence and distinct demographic histories.
Madeline G Bursell, Rebecca B Dikow, Henrique V Figueiró, Olga Dudchenko, Joseph P Flanagan, Warren E Johnson

iScience· December 2022

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Comparative genomics uncovers the evolutionary history, demography, and molecular adaptations of South American canids.
Daniel E Chavez, Ilan Gronau, Taylor Hains, Rebecca B Dikow, Paul B Frandsen, Warren E Johnson

Proc Natl Acad Sci U S A· August 2022

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Reference genomes for conservation.
Sadye Paez, Robert H S Kraus, Beth Shapiro, M Thomas P Gilbert, Erich D Jarvis, Rebecca N Johnson, Warren E Johnson

Science· July 2022

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Genomic Signatures of Divergent Ecological Strategies in a Recent Radiation of Neotropical Wild Cats.
Jorge L Ramirez, Jonas Lescroart, Henrique V Figueiró, Juan Pablo Torres-Florez, Priscilla M S Villela, Warren E Johnson

Mol Biol Evol· June 2022

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Incomplete lineage sorting and phenotypic evolution in marsupials.
Shaohong Feng, Ming Bai, Iker Rivas-González, Cai Li, Shiping Liu, Warren E Johnson

Cell· May 2022

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The Earth BioGenome Project 2020: Starting the clock.
Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Warren E Johnson

Proc Natl Acad Sci U S A· January 2022

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Standards recommendations for the Earth BioGenome Project.
Mara K N Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, Warren E Johnson, Rebecca N Johnson

Proc Natl Acad Sci U S A· January 2022

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Cross-species transmission of retroviruses among domestic and wild felids in human-occupied landscapes in Chile.
Irene Sacristán, Francisca Acuña, Emilio Aguilar, Sebastián García, María José López, Warren E Johnson

Evol Appl· April 2021

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Towards complete and error-free genome assemblies of all vertebrate species.
Arang Rhie, Shane A McCarthy, Olivier Fedrigo, Joana Damas, Giulio Formenti, Warren E Johnson

Nature· April 2021

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Past and Recent Effects of Livestock Activity on the Genetic Diversity and Population Structure of Native Guanaco Populations of Arid Patagonia.
Andrés Mesas, Ricardo Baldi, Benito A González, Virginia Burgi, Alexandra Chávez, Warren E Johnson

Animals (Basel)· April 2021

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Human Immunodeficiency Virus-Associated Myocardial Diastolic Dysfunction and Soluble ST2 Concentration in Tanzanian Adults: A Cross-Sectional Study.
Justin R Kingery, Parag Goyal, Rahul Hosalli, Myung Hee Lee, Bernard Desderius, Warren Johnson

J Infect Dis· January 2021

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Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens.
Ross Barnett, Michael V Westbury, Marcela Sandoval-Velasco, Filipe Garrett Vieira, Sungwon Jeon, Warren E Johnson

Curr Biol· December 2020

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Urinary biomarkers of mycobacterial load and treatment response in pulmonary tuberculosis.
Qianjing Xia, Myung Hee Lee, Kathleen F Walsh, Kathrine McAulay, James M Bean, Warren D Johnson

JCI Insight· September 2020

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The evolutionary history of extinct and living lions.
Marc de Manuel, Ross Barnett, Marcela Sandoval-Velasco, Nobuyuki Yamaguchi, Filipe Garrett Vieira, Warren E Johnson

Proc Natl Acad Sci U S A· May 2020

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Utility of genetic variation in coat color genes to distinguish wild, domestic and hybrid South American camelids for forensic and judicial applications.
Benito A González, Ana María Agapito, Francisco Novoa-Muñoz, Juliana Vianna, Warren E Johnson

Forensic Sci Int Genet· March 2020

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Author Correction: Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.
Nedda F Saremi, Megan A Supple, Ashley Byrne, James A Cahill, Luiz Lehmann Coutinho, Warren E Johnson

Nat Commun· November 2019

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Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.
Nedda F Saremi, Megan A Supple, Ashley Byrne, James A Cahill, Luiz Lehmann Coutinho, Warren E Johnson

Nat Commun· October 2019

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Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype.
Rui Borges, João Fonseca, Cidália Gomes, Warren E Johnson, Stephen J O'Brien

Genome Biol Evol· August 2019

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Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary.
Jean P Elbers, Mark F Rogers, Polina L Perelman, Anastasia A Proskuryakova, Natalia A Serdyukova, Warren E Johnson

Mol Ecol Resour· July 2019

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Whole Genome Sequencing and Re-sequencing of the Sable Antelope (): A Resource for Monitoring Diversity in and Populations.
Klaus-Peter Koepfli, Gaik Tamazian, David Wildt, Pavel Dobrynin, Changhoon Kim, Warren E Johnson

G3 (Bethesda)· June 2019

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Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks.
Marta Farré, Jaebum Kim, Anastasia A Proskuryakova, Yang Zhang, Anastasia I Kulemzina, Jennifer L Johnson, Warren E Johnson

Genome Res· April 2019

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