Publications by authors named "Yuri Wolf"

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An updated evolutionary classification of CRISPR-Cas systems including rare variants.
Kira S Makarova, Sergey A Shmakov, Yuri I Wolf, Pascal Mutz, Han Altae-Tran

Nat Microbiol· December 2025

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Mosquito vector ecologies are destabilizing as a result of climate change.
Evan J Curcio, Kai Xu, Harutyun Sahakyan, Yuri I Wolf, Elizabeth A Kelvin

Res Sq· December 2025

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Spatial-temporal genome analysis and its application for the prediction of functional systems in bacteria and archaea.
Svetlana Karamycheva, Yuri I Wolf, Eugene V Koonin, Kira S Makarova

mBio· December 2025

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Ecological determinants of altruism in prokaryote antivirus defense.
Dmitry A Biba, Kira S Makarova, Yuri I Wolf, Levi Waldron, Eugene V Koonin

Biol Direct· December 2025

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Taxonomy-free fecal microbiome profiles enable robust prediction of immunotherapy response and toxicity in melanoma.
Anastasia Lucas, McKenna Reale, Yuri I Wolf, Bryant Duong, Yichi Zhang

bioRxiv· November 2025

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The heterogeneous selection landscape of genome evolution in prokaryotes.
Roman Kogay, Svetlana Karamycheva, Nash D Rochman, Yuri I Wolf, Eugene V Koonin

bioRxiv· November 2025

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Evolution of antivirus defense in prokaryotes, depending on the environmental virus prevalence and virome dynamics.
Sanasar G Babajanyan, Sofya K Garushyants, Yuri I Wolf, Eugene V Koonin

mBio· October 2025

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ICTV Virus Taxonomy Profile: 2025.
Evelien M Adriaenssens, Ryan Cook, Valerian Dolja, Eugene V Koonin, Mart Krupovic, Yuri I Wolf

J Gen Virol· September 2025

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Mosquito vector ecologies are destabilizing as a result of climate change.
Evan J Curcio, Kai Xu, Harutyun Sahakyan, Yuri I Wolf, Elizabeth A Kelvin

bioRxiv· September 2025

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YprA family helicases provide the missing link between diverse prokaryotic immune systems.
Ryan T Bell, Thomas Gaudin, Yi Wu, Sofya K Garushyants, Harutyun Sahakyan, Yuri I Wolf

bioRxiv· September 2025

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In silico evolution of globular protein folds from random sequences.
Harutyun Sahakyan, Sanasar G Babajanyan, Yuri I Wolf, Eugene V Koonin

Proc Natl Acad Sci U S A· July 2025

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Genome-level selection in tumors as a universal marker of resistance to therapy.
Erez Persi, Praneeth R Sudalagunta, Yuri I Wolf, Rafael R Canevarolo, Mehdi Damaghi

Nat Commun· July 2025

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Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Animal dsRNA and ssRNA(-) Viruses Subcommittee, 2025.
Holly R Hughes, Matthew J Ballinger, Yiming Bao, Nicolas Bejerman, Kim R Blasdell, Yuri I Wolf

J Gen Virol· July 2025

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Dominant contribution of Asgard archaea to eukaryogenesis.
Victor Tobiasson, Jacob Luo, Yuri I Wolf, Eugene V Koonin

bioRxiv· July 2025

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Evolution of gene order in prokaryotes is driven primarily by gene gain and loss.
Shelly Brezner, Sofya K Garushyants, Yuri I Wolf, Eugene V Koonin, Sagi Snir

Proc Natl Acad Sci U S A· June 2025

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Annual (2024) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm : kingdom : phylum ).
Jens H Kuhn, Scott Adkins, Sergey V Alkhovsky, Wenxia An, Tatjana Avšič-Županc, Yuri I Wolf

J Gen Virol· June 2025

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Evolution of antivirus defense in prokaryotes depending on the environmental virus prevalence and virome dynamics.
Sanasar G Babajanyan, Sofya K Garushyants, Yuri I Wolf, Eugene V Koonin

bioRxiv· May 2025

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Horizontal Transfer of Bacterial Operons into Eukaryote Genomes.
Roman Kogay, Yuri I Wolf, Eugene V Koonin

Genome Biol Evol· April 2025

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The key role of cheaters in the persistence of cooperation.
Sanasar G Babajanyan, Yuri I Wolf, Eugene V Koonin, Nash D Rochman

Res Sq· April 2025

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Evolution of gene order in prokaryotes is driven primarily by gene gain and loss.
Shelly Brezner, Sofya K Garushyants, Yuri I Wolf, Eugene V Koonin, Sagi Snir

bioRxiv· April 2025

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The protein structurome of Orthornavirae and its dark matter.
Pascal Mutz, Antonio Pedro Camargo, Harutyun Sahakyan, Uri Neri, Anamarija Butkovic, Yuri I Wolf

mBio· February 2025

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"Paraxenoviridae", a putative family of ubiquitous marine bacteriophages with double-stranded RNA genomes.
Mitsuhiro Yoshida, Sofia Medvedeva, Akihito Fukudome, Yuri I Wolf, Syun-Ichi Urayama

bioRxiv· February 2025

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"Paraxenoviridae", a putative family of globally distributed marine bacteriophages with double-stranded RNA genomes.
Mitsuhiro Yoshida, Sofia Medvedeva, Akihito Fukudome, Yuri I Wolf, Syun-Ichi Urayama

ISME J· January 2025

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Ecological Determinants of Altruism in Prokaryote Antivirus Defense.
Dmitry A Biba, Kira S Makarova, Yuri I Wolf, Leavi Waldron, Eugene V Koonin

bioRxiv· November 2024

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The key role of cheaters in the persistence of cooperation.
Sanasar G Babajanyan, Yuri I Wolf, Eugene V Koonin, Nash D Rochman

bioRxiv· November 2024

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