Nat Microbiol November 2020 PMID 32669681

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology.

Andrew Rambaut, Edward C Holmes, Áine O'Toole, Verity Hill, John T McCrone, Christopher Ruis, Louis du Plessis, Oliver G Pybus

Download social card

Mentions

234
Peak: 16 in Jul 2020
across 5 sources since Jul 2020

Extended reach

578,883
potential audience

Total likes

3,808

Video views

375,389

Mentions per month

Jul 2020 – May 2024

Where it's discussed

  • News179 articles
  • X / Twitter40 posts
  • Blogs10 articles
  • YouTube3 videos
  • Facebook2 posts

AI synopsis

What people are saying

The discussions highlight the significance of the proposed nomenclature for SARS-CoV-2 lineages, with references to tools like pangolin and mentions of how it simplifies classification. Words like 'remarkable', 'automatic', and references to genomic epidemiology suggest a tone of recognition for its practical benefits, but the overall engagement remains moderate, focusing on understanding and applying the system rather than expressing strong opinions or critiques.

AgreementModerate agreement

Most discussions acknowledge the importance or usefulness of the new nomenclature system, with some expressing support for its potential to streamline viral classification.

InterestModerate interest

Posts display moderate curiosity, primarily focusing on its relevance to genomic epidemiology and tools like pangolin that automatically assign lineages.

EngagementModerate engagement

Participants reference specific features of the publication—such as its application, methodology, and tools involved—indicating a general, practical engagement.

ImpactModerate impact

The overall tone suggests that the system is viewed as having a positive yet somewhat incremental impact, likely aiding epidemiological tracking rather than introducing revolutionary change.

Abstract in brief

  • The paper introduces a new naming system for SARS-CoV-2 lineages that is based on their evolutionary relationships, helping scientists better track the virus's spread during the pandemic.
  • This system simplifies classification by limiting the number of lineage labels and removing inactive lineages, focusing only on those actively spreading.
  • The goal is to improve the ability to monitor and understand how different virus lineages contribute to COVID-19 outbreaks around the world.]

Top posts

Most liked on X and Bluesky
Nature Microbiology
@NatureMicrobiol · X

New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @arambaut @edwardcholmes @AineToole @viralverity @McCroneIV @Chris3Ruis @laduplessis More information here: https://t.co/ZbWDLRTqVk https://t.co/ZURLvjqbFd

Jul 15, 2020 · 31 likes · 13 shares · 74,090 followers View post →
Dr. Adnan Khan
@Dr_Khan · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/h6et8zLl62 cov-lineage https://t.co/2vbwfzI8EN GitHub PR https://t.co/norOfNAeOw /via @AineToole @viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK @EricTopol https://t.co/CA85rze4Ce

Jan 22, 2021 · 9 likes · 2 shares · 63,036 followers View post →
Vítor Borges
@borges__vitor · X

INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pangolin (https://t.co/u4VfQscSV6), a remarkable tool (developed by @arambaut, @AineToole and colleagues (https://t.co/wNmSYcF4Rl). How it works?

Apr 27, 2021 · 8 likes · 5 shares · 2,038 followers View post →
Peyu
@pedroerrazurizz · X

@sfvegap https://t.co/mJRSOEiVoJ https://t.co/M0OfRWSy20 https://t.co/A0OG50pTch https://t.co/xM0lQbqJRF Necesitas que siga?

May 26, 2024 · 7 likes · 207 followers View post →
Miss_Salmonella
@Miss_Salmonella · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology #SARSCoV2 #COVID19 #genomicepidemiology #NGS https://t.co/dgf0pYeToJ

Jul 15, 2020 · 2 likes · 11,380 followers View post →
Pablo Vinuesa
@pvinmex · X

https://t.co/y45ekZ1tIt A dynamic nomenclature proposal for #SARSCoV2 lineages to assist #genomic #Epidemiology Rambaut A, Holmes EC, O’Toole Á, Hill V, McCrone JT, Ruis C, du Plessis L & Pybus OG (2020) Nature Microbiology DOI:10.1038/s41564-020-0770-5

Jan 8, 2021 · 2 likes · 1 share · 1,579 followers View post →

All mentions

Peyu
@pedroerrazurizz · X

@sfvegap https://t.co/mJRSOEiVoJ https://t.co/M0OfRWSy20 https://t.co/A0OG50pTch https://t.co/xM0lQbqJRF Necesitas que siga?

May 26, 2024 · 7 likes · 207 followers View post →
bioRxiv Published
@biorxiv_pubd · X

A dynamic nomenclature proposal for SARS-CoV-2 to assist genomic epidemiology published as: https://t.co/VsIHvCOPeb @NatureMicrobiol #biorxiv

Mar 19, 2024 · 2,906 followers View post →
harmonist
@harmonist1 · X

RT @borges__vitor: INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pang…

Nov 27, 2021 · 5 shares · 542 followers View post →
clinton oxford
@OxfordClinton · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology “A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology”... https://t.co/0LfmBbIPKo

Sep 21, 2021 · 1 followers View post →
Kristal Garam Maleate
@_daunkelorrrr_ · X

Oh ini tata cara penamaan covid yang suka ada di tv tv. A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/DKcQwbJiLf

Aug 1, 2021 · 15 followers View post →
Sonia Vázquez Morón
@SoniaVM75 · X

RT @borges__vitor: INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pang…

Apr 28, 2021 · 5 shares · 30 followers View post →
Miguel Pinto
@MiguelCFPinto · X

RT @borges__vitor: INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pang…

Apr 28, 2021 · 5 shares · 173 followers View post →
Joël Mossong
@joel_mossong · X

RT @borges__vitor: INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pang…

Apr 28, 2021 · 5 shares · 3,845 followers View post →
Joana Isidro
@isidro_joana · X

RT @borges__vitor: INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pang…

Apr 27, 2021 · 5 shares · 273 followers View post →
Vítor Borges
@borges__vitor · X

INSaFLU (https://t.co/JRPcxOUWIT) now automatically assign #SARSCoV2 Pango lineages (https://t.co/7fdQuKuhUe) using pangolin (https://t.co/u4VfQscSV6), a remarkable tool (developed by @arambaut, @AineToole and colleagues (https://t.co/wNmSYcF4Rl). How it works?

Apr 27, 2021 · 8 likes · 5 shares · 2,038 followers View post →
Halbe Hibma
@eaglehibma · X

@4deerhound @OttenHM @toedoedeloe @rtvoost [3\n] veroorzaakt wordt door een coronavirus die een mutatie is van datzelfde coronavirus uit 2003: "A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology" https://t.co/9FDzQT1ZV8 Welke route het coronavirus heeft gevolgd is

Apr 27, 2021 · 875 followers View post →
Yosenapar, PhD
@Yosenapar · X

RT @kenmomd: ゲノム疫学、Pango lineagesの分類、命名の解説論文(B.1.1.7とかの) A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemi…

Mar 1, 2021 · 1 share · 210 followers View post →
Medical archivist
@olivierspeciel · X

A dynamic nomenclature proposal for SARS-CoV-2 to assist genomic epidemiology Andrew Rambaut, Edward C. Holmes, Verity Hill, Áine O’Toole, JT McCrone, Chris Ruis, Louis du Plessis, Oliver G. Pybus doi: https://t.co/KbKEhbhjbH Nature Microbiology  doi: 10.1038/s41564-020-0770-5

Feb 15, 2021 · 195 followers View post →
Europe PMC articles
@EuropePMC · X

New from #ERC_Research https://t.co/OeOP0lGlwp Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology.

Feb 3, 2021 · 1,552 followers View post →
Europe PMC articles
@EuropePMC · X

New from #wellcometrust https://t.co/OeOP0lGlwp Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology.

Feb 3, 2021 · 1,552 followers View post →
Journal Club Bot
@JC_pathogenomic · X

Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. https://t.co/KKmVISB23Y

Jan 31, 2021 · 282 followers View post →
HungryMicrobe
@hungrymicrobe · X

Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/lwv2kJQVJ8

Jan 29, 2021 · 1,451 followers View post →
Dr.AdnanKhanFanPage.
@AdnankhanFan · X

RT @Dr_Khan: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/h6et8zLl62 cov-lineage h…

Jan 23, 2021 · 2 shares · 2,955 followers View post →
M Haseeb Jutt Sadderh
@MSadderh · X

RT @Dr_Khan: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/h6et8zLl62 cov-lineage h…

Jan 22, 2021 · 2 shares · 275 followers View post →
Dr. Adnan Khan
@Dr_Khan · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/h6et8zLl62 cov-lineage https://t.co/2vbwfzI8EN GitHub PR https://t.co/norOfNAeOw /via @AineToole @viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK @EricTopol https://t.co/CA85rze4Ce

Jan 22, 2021 · 9 likes · 2 shares · 63,036 followers View post →
Antonio-Campos et al ;)
@aac_phd · X

RT @pvinmex: https://t.co/y45ekZ1tIt A dynamic nomenclature proposal for #SARSCoV2 lineages to assist #genomic #Epidemiology Rambaut A, Ho…

Jan 8, 2021 · 1 share · 631 followers View post →
Pablo Vinuesa
@pvinmex · X

https://t.co/y45ekZ1tIt A dynamic nomenclature proposal for #SARSCoV2 lineages to assist #genomic #Epidemiology Rambaut A, Holmes EC, O’Toole Á, Hill V, McCrone JT, Ruis C, du Plessis L & Pybus OG (2020) Nature Microbiology DOI:10.1038/s41564-020-0770-5

Jan 8, 2021 · 2 likes · 1 share · 1,579 followers View post →
Raymond Schinazi
@drugbuster21 · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology https://t.co/oM6WezZ7X5

Jan 8, 2021 · 1 like · 909 followers View post →
Vaccinated Lone User of NIOSH-Certified Respirator
@JeanMichelFleur · X

Rambaut, A. et al., 2020. A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. Nature Microbiology, 5(11), pp.1403–1407. Available at: https://t.co/b6sVzFgYIY https://t.co/3Tm6NFHIpk

Jan 3, 2021 · 644 followers View post →
Prem U Pungaliya
@prem_pungaliya · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology https://t.co/sFeLbNoXhL

Jul 25, 2020 · 85 followers View post →
Journal Club Bot
@JC_pathogenomic · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. https://t.co/NWYd4vDFOO

Jul 17, 2020 · 282 followers View post →
Spyros Lytras
@SpyrosLytras · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 16, 2020 · 13 shares · 2,848 followers View post →
Jenny LI
@neptuno_girl · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 16, 2020 · 13 shares · 110 followers View post →
Tim Regan Lab
@TimReganLab · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 1,187 followers View post →
Marcus Mah
@marcusmahh · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 1,501 followers View post →
Víctor G Tagua
@Victagua · X

RT @SciArt3D: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology https://t.co/gPW…

Jul 15, 2020 · 1 share · 4,578 followers View post →
SciArt3D
@SciArt3D · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology | Nature Microbiology https://t.co/gPWdNkdErR

Jul 15, 2020 · 1 share · 581 followers View post →
Áine O'Toole
@AineToole · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 6,321 followers View post →
Blair Strang
@StrangVirusLab · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 1,020 followers View post →
Bill Wang
@iu22ie33 · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 10,704 followers View post →
JT McCrone
@McCroneIV · X

RT @NatureMicrobiol: New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @…

Jul 15, 2020 · 13 shares · 532 followers View post →
Nature Microbiology
@NatureMicrobiol · X

New online: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology by @EvolveDotZoo @arambaut @edwardcholmes @AineToole @viralverity @McCroneIV @Chris3Ruis @laduplessis More information here: https://t.co/ZbWDLRTqVk https://t.co/ZURLvjqbFd

Jul 15, 2020 · 31 likes · 13 shares · 74,090 followers View post →
HungryMicrobe
@hungrymicrobe · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/EX7aW1LkFA

Jul 15, 2020 · 1,451 followers View post →
Miss_Salmonella
@Miss_Salmonella · X

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology #SARSCoV2 #COVID19 #genomicepidemiology #NGS https://t.co/dgf0pYeToJ

Jul 15, 2020 · 2 likes · 11,380 followers View post →
micropapers
@micro_papers · X

NM/ A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology https://t.co/BWCAe4Ubxg

Jul 15, 2020 · 333 followers View post →