Genome Biol January 2022 PMID 34991667

Universal annotation of the human genome through integration of over a thousand epigenomic datasets.

Ha Vu, Jason Ernst

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Mentions

88
Peak: 43 in Jan 2022
across 3 sources since Nov 2020

Extended reach

444,267
potential audience

Total likes

242

Video views

1,193

Mentions per month

Nov 2020 – Sep 2023

Where it's discussed

  • X / Twitter84 posts
  • YouTube2 videos
  • Blogs2 articles

AI synopsis

What people are saying

Several posts highlight specific aspects of the research, discussing updates to ChromHMM and mentioning aspirations for involvement in non-coding research. Comments such as 'wishing I was more in non-coding research space' illustrate a desire to engage more deeply with the topic, while phrases like 'scalability challenges' suggest users are contemplating the practical implications of the findings. This choice of language reflects an overall enthusiastic tone, indicating appreciation for the study's contributions to the field.

AgreementModerate agreement

The majority of discussions reflect a positive stance toward the publication's findings.

InterestHigh interest

There is a high level of curiosity as many participants express a desire to learn more about the implications of the research.

EngagementModerate engagement

While many posts share the article, a few delve into technical details, indicating a moderate level of engagement.

ImpactHigh impact

Participants view the research as highly influential, underscoring its importance in advancing the understanding of the human genome.

Abstract in brief

  • This study integrates over 1,000 epigenomic datasets to produce a universal chromatin state annotation of the human genome, moving beyond traditional cell-type-specific annotations.
  • The enhanced version of ChromHMM used, termed the fullstack model, effectively characterizes chromatin states and provides predictive insights on genomic features.
  • The fullstack model enriches our understanding of the noncoding genome and serves as a valuable resource for researchers, complementing existing cell-type-specific annotations.

Top posts

Most liked on X and Bluesky
BioDecoded
@BioDecoded · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https://t.co/sxO9lls4Na #Bioinformatics https://t.co/wAqFndKMWY

Feb 9, 2022 · 90 likes · 33 shares · 8,895 followers View post →
BioDecoded
@BioDecoded · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https://t.co/sxO9llJ7Pa #Bioinformatics https://t.co/AZM5Sm7vPm

Jan 9, 2022 · 64 likes · 22 shares · 8,895 followers View post →
Genome Biology
@GenomeBiology · X

Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over 1000 datasets from 100 cell types, by @HaVu_science and @JasonErnstLab. The 'stacked' model improves match to external annotation https://t.co/fSRKnvljbP https://t.co/Ds5W5zyKBy

Jan 7, 2022 · 47 likes · 8 shares · 90,001 followers View post →
Javier Santoyo
@jsantoyo · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation https://t.co/GnmS5AlIqA @GenomeBiology

Jan 9, 2022 · 10 likes · 6 shares · 6,133 followers View post →
OKI, Shinya(沖 真弥)
@oki_shinya · X

ChromHMM has been updated for more than 100 cell types. https://t.co/ESzxAQUntw

Jan 15, 2022 · 6 likes · 474 followers View post →
bioRxiv Bioinfo
@biorxiv_bioinfo · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/Zk0X40BM4K #biorxiv_bioinfo

Nov 19, 2020 · 4 likes · 2 shares · 18,102 followers View post →

All mentions

Mwinde Mwolilo
@ThinkerTweet22 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 13, 2022 · 33 shares · 371 followers View post →
Diego
@DiegoSierraRa · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 13, 2022 · 33 shares · 9 followers View post →
Yang Fang
@xiaoxiaoyangs · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 10, 2022 · 33 shares · 23 followers View post →
BEN HASSINE NAJLA
@BHNajla_Bioinfo · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 10, 2022 · 33 shares · 364 followers View post →
Feng Jiang
@fengj03 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 10, 2022 · 33 shares · 123 followers View post →
Sarah Gawlak
@scgawlak · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 10, 2022 · 33 shares · 114 followers View post →
Bacterial ChemBot
@bacterialchem · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 310 followers View post →
Masa-aki Yoshida
@yoshidamasaaki · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 2,851 followers View post →
Australasian Genomic Technologies Association AGTA
@agtaGenomics · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 2,438 followers View post →
Takashi Kohno@Natl Cancer Ctr, Japan
@TakashiKohno2 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 598 followers View post →
Martin Correa
@martinrafco · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 232 followers View post →
Dennis Hazelett
@vigocarpathian · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 538 followers View post →
Lena Motsenigo
@LenaAlamanou · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 43 followers View post →
Gaúcho
@YungHusband_ · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 8,358 followers View post →
casix
@casix_xisac · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 255 followers View post →
Brian Dean
@bdean_ · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 557 followers View post →
Zixuan (Eleanor) Zhang
@elezzx2020 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 425 followers View post →
Barney Pell
@barneyp · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 6,556 followers View post →
priya joseph
@ayirpelle · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 4,915 followers View post →
Jorge Hurtado Soriano
@soriano_hurtado · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 55 followers View post →
Yuval Itan
@ItanLab · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 934 followers View post →
Dr Tripathi
@spacex3000 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 118 followers View post →
elaina graham
@perilousUnknown · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 534 followers View post →
Lincoln Rhyme
@LincolnRhyme9 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 777 followers View post →
Bioinformatics (Diversity)
@BBiosys · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 9 followers View post →
Saubashya Sur, PhD
@SaubashyaSur · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 770 followers View post →
Bindikannan
@Bindikannan963 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 1,102 followers View post →
Laith
@our_science · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 3,905 followers View post →
JeanDelmotte
@DrStagiaire · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 358 followers View post →
Ron Finn
@Finnsense · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 1,120 followers View post →
رحابام
@Rehabiamu · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Feb 9, 2022 · 33 shares · 252 followers View post →
BioDecoded
@BioDecoded · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https://t.co/sxO9lls4Na #Bioinformatics https://t.co/wAqFndKMWY

Feb 9, 2022 · 90 likes · 33 shares · 8,895 followers View post →
OKI, Shinya(沖 真弥)
@oki_shinya · X

ChromHMM has been updated for more than 100 cell types. https://t.co/ESzxAQUntw

Jan 15, 2022 · 6 likes · 474 followers View post →
Rindra Rakotoarivony, PhD
@RindraRakot · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 12, 2022 · 22 shares · 665 followers View post →
Maria Francis Palafox
@mariafpalafox · X

wishing i was more in non-coding research space after reading this paper by @HaVu_science on universal chromatin state annotation

Jan 11, 2022 · 2 likes · 374 followers View post →
Rintu Kutum
@rintukutum · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 11, 2022 · 22 shares · 1,258 followers View post →
Dr Anthony Martin
@AMAinsight · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 11, 2022 · 22 shares · 912 followers View post →
Roshan Padmanabhan
@roshan_818 · X

https://t.co/SHj0JmeEYD

Jan 11, 2022 · 216 followers View post →
tranquilScientist
@MazumderMohit · X

https://t.co/dMeyYcL9WR

Jan 10, 2022 · 1 like · 57 followers View post →
Jason Ernst Lab
@JasonErnstLab · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 209 followers View post →
Martin Correa
@martinrafco · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 232 followers View post →
Dr Maharudra Kumbhar
@dr_maharudra · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 2 followers View post →
Juan Martinez-Villalobos
@Jhonmart3 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 1,539 followers View post →
Mark Borris Aldonza (@precursorcell.bsky.social
@PrecursorCell · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 1,386 followers View post →
Hector Corrada Bravo
@hcorrada · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 1,062 followers View post →
Martin Smith
@martinalexsmith · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 3,584 followers View post →
ملتقى علوم الاحياء
@Biology1802 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 54,601 followers View post →
Yasharz
@YasharZeighami · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 626 followers View post →
Gustavo Ybazeta
@ybazetag · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 440 followers View post →
Edoardo Giacopuzzi
@Supergecko · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 10, 2022 · 6 shares · 225 followers View post →
Saubashya Sur, PhD
@SaubashyaSur · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 770 followers View post →
Bioinformatics (Diversity)
@BBiosys · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 9 followers View post →
Addict_Opiate, MD, MPH, DMT, MDMA™
@addict_opiate · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 10, 2022 · 22 shares · 477 followers View post →
Daniel E. Adkins
@daniel_e_adkins · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 10, 2022 · 6 shares · 6,547 followers View post →
ZDQ&Interlaken
@ZDQ_Interlaken · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 9, 2022 · 22 shares · 117 followers View post →
Nicholas Mancuso
@nmancuso_ · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 9, 2022 · 6 shares · 2,628 followers View post →
رحابام
@Rehabiamu · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 9, 2022 · 22 shares · 252 followers View post →
@dmcg@genomic.social
@David_McGaughey · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 9, 2022 · 6 shares · 994 followers View post →
Dr. د. عبدالواحد الزهراني
@ralzahrani2020 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 9, 2022 · 22 shares · 4,353 followers View post →
Gaurav Jain
@gauravjain49 · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 9, 2022 · 22 shares · 653 followers View post →
CompChemBio Bot
@CompChemBioBot · X

RT @BioDecoded: Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https:…

Jan 9, 2022 · 22 shares · 2,761 followers View post →
BioDecoded
@BioDecoded · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets | Genome Biology https://t.co/sxO9llJ7Pa #Bioinformatics https://t.co/AZM5Sm7vPm

Jan 9, 2022 · 64 likes · 22 shares · 8,895 followers View post →
Edinburgh Watch
@EdinburghWatch · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 9, 2022 · 6 shares · 12,033 followers View post →
Taco Jesse
@TJesse62 · X

RT @jsantoyo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation htt…

Jan 9, 2022 · 6 shares · 1,734 followers View post →
Javier Santoyo
@jsantoyo · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets. #EpigenomeAnnotation https://t.co/GnmS5AlIqA @GenomeBiology

Jan 9, 2022 · 10 likes · 6 shares · 6,133 followers View post →
Victor V. Lobanenkov
@boris_ctcf · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets. Large-scale applications of stacked modeling have previously posed scalability challenges. https://t.co/yxBXEnRSrL

Jan 8, 2022 · 2,043 followers View post →
Saubashya Sur, PhD
@SaubashyaSur · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 8, 2022 · 8 shares · 770 followers View post →
GeomStatsCS
@CompStatsGeom · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 198 followers View post →
UCLA_Computational Medicine
@CompMedUCLA · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 1,168 followers View post →
Xiangfu (Joey) Zhong
@joey0576 · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 329 followers View post →
Jason Ernst
@jernst98 · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 83 followers View post →
Jason Ernst Lab
@JasonErnstLab · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 209 followers View post →
José Luis Ruiz
@pepeluisrr · X

RT @GenomeBiology: Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over…

Jan 7, 2022 · 8 shares · 595 followers View post →
Genome Biology
@GenomeBiology · X

Chromatin state annotation of the human genome using a version of ChromHMM adapted for large scale use, applied to over 1000 datasets from 100 cell types, by @HaVu_science and @JasonErnstLab. The 'stacked' model improves match to external annotation https://t.co/fSRKnvljbP https://t.co/Ds5W5zyKBy

Jan 7, 2022 · 47 likes · 8 shares · 90,001 followers View post →
MyJournals
@myjournals · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/wxo3aB9kA5

Jan 6, 2022 · 556 followers View post →
Tregouet David-Alexandre
@TregouetBPH · X

RT @biorxiv_bioinfo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/Zk0X…

Nov 22, 2020 · 2 shares · 302 followers View post →
antisense.
@razoralign · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/sHWVlZsPWZ

Nov 20, 2020 · 15,950 followers View post →
CompChemBio Bot
@CompChemBioBot · X

RT @SeqComplete: #BioIT #BioInformatics Universal annotation of the human genome through integration of over a thousand epigenomic datasets…

Nov 20, 2020 · 1 share · 2,761 followers View post →
SeqComplete
@SeqComplete · X

#BioIT #BioInformatics Universal annotation of the human genome through integration of over a thousand epigenomic datasets [NEW RESULTS] https://t.co/gjTuqibGCY

Nov 20, 2020 · 1 like · 1 share · 4,408 followers View post →
Helio Rocha
@_elioRocha · X

#bioRxiv Universal annotation of the human genome through integration of over a thousand epigenomic datasets #bioinfo https://t.co/sZtb4Eh3aB

Nov 20, 2020 · 609 followers View post →
sRNApapers
@sRNA_papers · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/4BAd7hYSHN

Nov 19, 2020 · 168 followers View post →
Douglas Wu
@wckdouglas · X

RT @biorxiv_bioinfo: Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/Zk0X…

Nov 19, 2020 · 2 shares · 366 followers View post →
bioRxiv
@biorxivpreprint · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/elotZHDjGM #bioRxiv

Nov 19, 2020 · 2 likes · 137,022 followers View post →
bioRxiv Bioinfo
@biorxiv_bioinfo · X

Universal annotation of the human genome through integration of over a thousand epigenomic datasets https://t.co/Zk0X40BM4K #biorxiv_bioinfo

Nov 19, 2020 · 4 likes · 2 shares · 18,102 followers View post →