Sci Data April 2023 PMID 37105953

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of novel genes.

Daniel K Hartline, Matthew C Cieslak, Ann M Castelfranco, Brandon Lieberman, Vittoria Roncalli, Petra H Lenz

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Mentions

5
Peak: 2 in Apr 2023
across 3 sources since Apr 2023

Extended reach

2,147
potential audience

Total likes

1

Video views

26

Mentions per month

Apr 2023 – Jul 2023

Where it's discussed

  • X / Twitter2 posts
  • Reddit2 posts
  • YouTube1 videos

AI synopsis

What people are saying

The overall sentiment reflects a positive acknowledgment of the publication’s significance, with comments pointing out its pioneering contributions like the first transcriptomes for several copepod species and their value for ecological research. The tone and choice of words convey excitement about advancing understanding of marine organisms and their genetics.

AgreementModerate agreement

The posts generally acknowledge the importance and validity of the research, emphasizing the novelty of the transcriptomes and their utility for understanding marine zooplankton genetics.

InterestHigh interest

Many discussions express high interest, highlighting how the resource can advance ecological and genetic studies, with words like 'valuable' and 'first data' indicating enthusiasm.

EngagementModerate engagement

Posts show moderate engagement by referencing the methods used and potential applications, such as gene discovery and ecological insights, though not deeply analyzing the data.

ImpactModerate impact

The discussions suggest a recognition of the study's potential to influence future research in marine biology and genomics, though some posts are more informative than transformative.

Abstract in brief

  • This study reports the creation of eight new high-quality de novo transcriptomes from six species of calanoid copepods, including the first data for four of them, providing valuable genetic information for ecologically important marine zooplankton in the North Pacific.
  • The researchers used total RNA from individual copepods to build gene libraries, sequenced them on an Illumina platform, and assembled the data with Trinity software, ensuring quality and validation for reliable gene expression analysis.
  • The resulting transcriptome data serve as a resource for studying gene expression patterns across different species and biological processes, facilitating the discovery of novel, evolutionarily significant proteins and enhancing understanding of copepod biology and adaptation.]

Top posts

Most liked on X and Bluesky
RNAseq_software
@RnaseqS · X

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of novel genes: This study presents eight new high-quality de novo transcriptomes from six co-occurring species of calanoid copepods, the first published for… https://t.co/vFGWANWPpU

Apr 28, 2023 · 1 like · 313 followers View post →
Transcriptomes
@transcriptomes · X

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of ... https://t.co/939tuLSB3D

Apr 28, 2023 · 1,809 followers View post →

All mentions

Transcriptomes
@transcriptomes · X

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of ... https://t.co/939tuLSB3D

Apr 28, 2023 · 1,809 followers View post →
RNAseq_software
@RnaseqS · X

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of novel genes: This study presents eight new high-quality de novo transcriptomes from six co-occurring species of calanoid copepods, the first published for… https://t.co/vFGWANWPpU

Apr 28, 2023 · 1 like · 313 followers View post →