Final talk in the morning session #biodata22 by Can Chen on teasing out missing reactions in genome‐scale metabolic networks through deep learning @BrighamWomens https://t.co/igmT4IMGTc
Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning.
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Jun 2022 – Jul 2023Where it's discussed
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X / Twitter14 posts
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Blogs2 articles
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YouTube1 videos
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What people are saying
The overall tone indicates positive recognition of the research's novelty, with mentions of the deep learning approach and its ability to improve genome-scale metabolic models, using phrases like 'teasing out missing reactions' and 'outperforms existing methods.' The frequent references to conferences, publications, and the technical language reflect both high interest and engagement, emphasizing the study's potential impact in computational biology.
Most discussions highlight the significance and innovation of the research, with some expressions of support and recognition of its potential.
Posts consistently show high curiosity about the methodology and implications, indicating strong academic and professional interest.
Comments reference specific methods like hypergraph learning and emphasize the importance of filling knowledge gaps, demonstrating moderate depth of engagement.
The discussions suggest the publication could influence future research and tool development within metabolic modeling, though evidence of widespread adoption isn't explicit.
Abstract in brief
- The study introduces a new deep learning tool called CHESHIRE that predicts missing reactions in genome-scale metabolic models (GEMs) using only the network's structure, without needing experimental data.
- CHESHIRE outperforms existing methods by accurately identifying omitted reactions across over 900 high-quality GEMs and enhances predictions of metabolic outputs like fermentation products and amino acids.
- This approach helps quickly and reliably fill knowledge gaps in metabolic networks, aiding the understanding and curation of GEMs to better reflect real cellular processes.
Top posts
Most liked on X and BlueskyTeasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning https://t.co/9V9UwaI7md #biorxiv_bioinfo
Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning https://t.co/Til67hNHvF #bioRxiv
Closing out the ML session is Can Chen on “Teasing out missing reactions in genome‐scale metabolic networks through deep learning” #biodata22 https://t.co/z0C3yd23i9
#BioIT #BioInformatics Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning [NEW RESULTS] https://t.co/ngQZ2vVRtJ
Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/RTz6XA1wIf #MachineLearning #NatureJournal #AI https://t.co/3QK5k2maUL
All mentions
Hypergraph Learning for Missing Reactions in Metabolic Networks
This video introduces CHESHIRE, a deep learning tool that predicts missing reactions in genome-scale metabolic models using network structure, enhancing the accuracy of metabolic network representations and aiding…
Featured today by @MSKLibrary: Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/xvaTy2xMKT @cliao345
Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/3jS3GrxYuC #DL #AI #ML #DeepLearning #ArtificialIntelligence #MachineLearning #ComputerVision #AutonomousVehicles #NeuroMorphic #Robotics
Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/RTz6XA1wIf #MachineLearning #NatureJournal #AI https://t.co/3QK5k2maUL
Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/rPJrYRS05q https://t.co/RhL79Is4hB
RT Teasing out missing reactions in genome-scale metabolic networks through hypergraph learning https://t.co/Scz41IqFuL https://t.co/sRNQ2OlGAS
RT @marinkazitnik: Final talk in the morning session #biodata22 by Can Chen on teasing out missing reactions in genome‐scale metabolic netw…
Can Chen #biodata22 with "Teasing out missing reactions in genome‐scale metabolic networks through deep learning". Problem: Completeness of genome-scale metabolic models (GEMs) is challenging, existing tools for finding inconsistencies are limited in accuracy and (1/2)
Final talk in the morning session #biodata22 by Can Chen on teasing out missing reactions in genome‐scale metabolic networks through deep learning @BrighamWomens https://t.co/igmT4IMGTc
Closing out the ML session is Can Chen on “Teasing out missing reactions in genome‐scale metabolic networks through deep learning” #biodata22 https://t.co/z0C3yd23i9
RT @SeqComplete: #BioIT #BioInformatics Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning [NEW RESULTS…
#BioIT #BioInformatics Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning [NEW RESULTS] https://t.co/ngQZ2vVRtJ
#bioRxiv Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning #bioinfo https://t.co/SUxMlDas6H
Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning https://t.co/9V9UwaI7md #biorxiv_bioinfo
Teasing out Missing Reactions in Genome-scale Metabolic Networks through Deep Learning https://t.co/Til67hNHvF #bioRxiv