Nat Commun July 2023 PMID 37429865

nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes.

Lukas M Weber, Arkajyoti Saha, Abhirup Datta, Kasper D Hansen, Stephanie C Hicks

Mentions

8
Peak: 3 in Jul 2023
across 4 sources since Jul 2023

Extended reach

3,563
potential audience

Total likes

3

Video views

8

Mentions per month

Jul 2023 – Oct 2023

Where it's discussed

  • X / Twitter3 posts
  • Facebook2 posts
  • Blogs2 articles
  • YouTube1 videos

AI synopsis

What people are saying

Several discussions reference the article by quoting its title, such as 'nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes,' with little additional commentary, indicating casual recognition rather than in-depth engagement. The tone and context suggest a general acknowledgment rather than significant enthusiasm or critique, which aligns with the moderate interest and impact scores.

AgreementNeither agree nor disagree

The posts do not show strong disagreement or strong support; they mainly acknowledge the publication without explicit endorsement or criticism.

InterestModerate interest

The interest score is modest because discussions simply mention the article title without deep analysis or critique.

EngagementNeutral engagement

The engagement appears superficial, with minimal interaction or elaboration beyond quoting or referencing the publication.

ImpactModerate impact

The perceived impact is moderate, as the posts suggest awareness but do not indicate widespread influence or application.

Abstract in brief

  • nnSVG is a new method for finding genes that change in expression based on their spatial location in tissue samples.
  • It leverages nearest-neighbor Gaussian processes to continuously identify these spatially variable genes and improves precision with gene-specific estimates.
  • The method is efficient and scales well with increasing spatial data, and its effectiveness has been validated through real experiments and simulations.

Top posts

Most liked on X and Bluesky
Jungsu Kim
@jungsukim77 · X

[Spatial transcriptomics Pipeline] nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes https://t.co/JIfgVKzSq0

Jul 11, 2023 · 2 likes · 1,051 followers View post →
siero
@siero5335 · X

面白そう: "nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes", https://t.co/ZZD20P0Nog

Jul 10, 2023 · 1 like · 2 shares · 1,274 followers View post →

All mentions

Jungsu Kim
@jungsukim77 · X

[Spatial transcriptomics Pipeline] nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes https://t.co/JIfgVKzSq0

Jul 11, 2023 · 2 likes · 1,051 followers View post →
know thyself(子豚のオリバー)
@thyself_know · X

RT @siero5335: 面白そう: "nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes", https:/…

Jul 10, 2023 · 2 shares · 1,223 followers View post →
siero
@siero5335 · X

面白そう: "nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes", https://t.co/ZZD20P0Nog

Jul 10, 2023 · 1 like · 2 shares · 1,274 followers View post →