Publications by authors named "AJ Waters"

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A pangenome and pantranscriptome of hexaploid oat.
Raz Avni, Nadia Kamal, Lidija Bitz, Eric N Jellen, Wubishet A Bekele, Amanda J Waters

Nature· January 2026

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Author Correction: A pangenome and pantranscriptome of hexaploid oat.
Raz Avni, Nadia Kamal, Lidija Bitz, Eric N Jellen, Wubishet A Bekele, Amanda J Waters

Nature· December 2025

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Ten-Year Trends in Digital Rectal Exam Results and Prostate Cancer Detection: Insights from the PLCO Trial.
Kevin Guan, Bassam Dahman, Shyh-Han Tan, Dechang Chen, Andrew J Waters

Res Rep Urol· September 2025

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Using Machine Learning to Create Prognostic Systems for Primary Prostate Cancer.
Kevin Guan, Andy Guan, Anwar E Ahmed, Andrew J Waters, Shyh-Han Tan

Diagnostics (Basel)· September 2025

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Comprehensively Testing the Function of Missense Variation in the Tumour Suppressor.
Daniel Zimmerman, Atina Cote, Warren van Loggerenberg, Marinella Gebbia, Nishka Kishore, Andrew J Waters

bioRxiv· July 2025

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Protocol for the functional evaluation of genetic variants using saturation genome editing.
Sofia Obolenski, Rebeca Olvera-León, Dijue Sun, David J Adams, Andrew J Waters

STAR Protoc· June 2025

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Disparities in group-based medical mistrust and associations with mental health symptoms during the COVID-19 pandemic.
Jeremy W Luk, LaToya Sewell, Bethany L Stangl, Courtney L Vaughan, Andrew J Waters

J Affect Disord· April 2025

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Evaluating the Acceptability and Feasibility of Collecting Passive Smartphone Data to Estimate Psychological Functioning in U.S. Service Members and Veterans: A Pilot Study.
Lauren S Schultz, Mikela A Murphy, Macayla Donegan, Jonathan Knights, Justin T Baker, Andrew J Waters

Mil Med· January 2025

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High-resolution functional mapping of RAD51C by saturation genome editing.
Rebeca Olvera-León, Fang Zhang, Victoria Offord, Yajie Zhao, Hong Kee Tan, Andrew J Waters

Cell· October 2024

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A Pilot Randomized Control Trial Testing a Smartphone-Delivered Food Attention Retraining Program in Adolescent Girls with Overweight or Obesity.
Megan N Parker, Bess F Bloomer, Jeffrey D Stout, Meghan E Byrne, Natasha A Schvey, Andrew J Waters

Nutrients· October 2024

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Saturation genome editing of BAP1 functionally classifies somatic and germline variants.
Andrew J Waters, Timothy Brendler-Spaeth, Danielle Smith, Victoria Offord, Hong Kee Tan

Nat Genet· July 2024

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Analyzing the functional effects of DNA variants with gene editing.
Sarah Cooper, Sofia Obolenski, Andrew J Waters, Andrew R Bassett, Matthew A Coelho

Cell Rep Methods· May 2024

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Saturation genome editing of DDX3X clarifies pathogenicity of germline and somatic variation.
Elizabeth J Radford, Hong-Kee Tan, Malin H L Andersson, James D Stephenson, Eugene J Gardner, Andrew J Waters

Nat Commun· December 2023

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Pilot study of attentional retraining for postpartum smoking relapse.
Ariadna Forray, R Gwen Gunter-Riley, Caro Maltz, Andrew J Waters

Front Psychiatry· October 2023

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Searching for answers: expert pattern recognition and planning.
Fernand Gobet, Andrew J Waters

Trends Cogn Sci· September 2023

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Integrating cognitive bias modification for pain and opioid cues into medication for opioid use disorder clinical care: Feasibility, acceptability, and preliminary results.
R Ross MacLean, Alicia A Heapy, Andrew J Waters, Noah Wolkowicz, Sara K Szollosy

Drug Alcohol Depend· May 2023

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Association between burnout and insomnia in U.S. Air Force Pararescue personnel: A cross-sectional study.
Sowan Kang, Andrew J Waters, Craig J Bryan

Mil Psychol· May 2023

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Corrigendum to "Affect, motivation, temptation, and drinking among alcohol-dependent outpatients trying to maintain abstinence: An Ecological Momentary Assessment study" [Drug Alcohol Depend. 206 (2020) 107626].
Andrew J Waters, Tim M Schoenmakers, Michelle Snelleman, Edwin H Szeto, Ingmar H A Franken

Drug Alcohol Depend· March 2023

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The impact of racially-targeted food marketing and attentional biases on consumption in Black adolescent females with and without obesity: Pilot data from the Black Adolescent & Entertainment (BAE) study.
Omni Cassidy, Marian Tanofsky-Kraff, Andrew J Waters, Lisa M Shank, Abigail Pine

PLoS One· January 2023

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The mosaic oat genome gives insights into a uniquely healthy cereal crop.
Nadia Kamal, Nikos Tsardakas Renhuldt, Johan Bentzer, Heidrun Gundlach, Georg Haberer, Amanda J Waters

Nature· June 2022

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GrainGenes: a data-rich repository for small grains genetics and genomics.
Eric Yao, Victoria C Blake, Laurel Cooper, Charlene P Wight, Steve Michel, Amanda J Waters

Database (Oxford)· May 2022

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Variant Library Annotation Tool (VaLiAnT): an oligonucleotide library design and annotation tool for saturation genome editing and other deep mutational scanning experiments.
Luca Barbon, Victoria Offord, Elizabeth J Radford, Adam P Butler, Sebastian S Gerety, Andrew J Waters

Bioinformatics· January 2022

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Predicting moisture content during maize nixtamalization using machine learning with NIR spectroscopy.
Michael J Burns, Jonathan S Renk, David P Eickholt, Amanda M Gilbert, Travis J Hattery, Amanda J Waters

Theor Appl Genet· November 2021

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