Publications by authors named "Aaron B A Shafer"

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Optimising Genome-Wide Detection of Runs of Homozygosity: Impacts of Reference Genome Quality and Sequencing Parameters on Inbreeding Assessment.
Minhui Shi, Haimeng Li, Aaron B A Shafer, Tianming Lan

Mol Ecol Resour· January 2026

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The Monocrotaline Model of Hypertension Leads to Cachexia in Male but Not Female Mice.
Abbey L Politeski, Alexander Q L Rico, Jack Cambell, Julio G Cisneros Medrano, Ben Witmer, Aaron B A Shafer

J Cachexia Sarcopenia Muscle· December 2025

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Runs of Homozygosity and Inferences in Wild Populations.
Aaron B A Shafer, Marty Kardos

Mol Ecol· February 2025

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Comparative Genomics of the World's Smallest Mammals Reveals Links to Echolocation, Metabolism, and Body Size Plasticity.
Marie-Laurence Cossette, Donald T Stewart, Aaron B A Shafer

Genome Biol Evol· November 2024

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Epigenetic clocks, sex markers and age-class diagnostics in three harvested large mammals.
Natalie Czajka, Joseph M Northrup, Meaghan J Jones, Aaron B A Shafer

Mol Ecol Resour· July 2024

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Island demographics and trait associations in white-tailed deer.
Brooklyn S Cars, Camille Kessler, Eric A Hoffman, Steeve D Côté, Daniel Koelsch, Aaron B A Shafer

Heredity (Edinb)· July 2024

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Genomic Analyses Capture the Human-Induced Demographic Collapse and Recovery in a Wide-Ranging Cervid.
Camille Kessler, Aaron B A Shafer

Mol Biol Evol· March 2024

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Contrasting whole-genome and reduced representation sequencing for population demographic and adaptive inference: an alpine mammal case study.
Daria Martchenko, Aaron B A Shafer

Heredity (Edinb)· October 2023

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DNA methylation networks underlying mammalian traits.
Amin Haghani, Caesar Z Li, Todd R Robeck, Joshua Zhang, Ake T Lu, Aaron B A Shafer

Science· August 2023

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Genomic health is dependent on long-term population demographic history.
Eric Wootton, Claude Robert, Joëlle Taillon, Steeve D Côté, Aaron B A Shafer

Mol Ecol· April 2023

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Speciation without gene-flow in hybridizing deer.
Camille Kessler, Eric Wootton, Aaron B A Shafer

Mol Ecol· March 2023

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Characterizing nutritional phenotypes using experimental nutrigenomics: Is there nutrient-specificity to different types of dietary stress?
Catriona L C Jones, Aaron B A Shafer, Paul C Frost

Mol Ecol· March 2023

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Epigenetics and island-mainland divergence in an insectivorous small mammal.
Marie-Laurence Cossette, Donald T Stewart, Amin Haghani, Joseph A Zoller, Aaron B A Shafer

Mol Ecol· January 2023

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Genomic correlates for migratory direction in a free-ranging cervid.
Maegwin Bonar, Spencer J Anderson, Charles R Anderson, George Wittemyer, Joseph M Northrup, Aaron B A Shafer

Proc Biol Sci· December 2022

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Demographic history and conservation genomics of caribou () in Québec.
Morgan N Dedato, Claude Robert, Joëlle Taillon, Aaron B A Shafer, Steeve D Côté

Evol Appl· December 2022

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Using total RNA quality metrics for time since deposition estimates in degrading bloodstains.
Colin I Elliott, Theresa E Stotesbury, Aaron B A Shafer

J Forensic Sci· September 2022

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Genomic diversity and demographic history of the Dromiciops genus (Marsupialia: Microbiotheriidae).
Julian F Quintero-Galvis, Pablo Saenz-Agudelo, Guillermo C Amico, Soledad Vazquez, Aaron B A Shafer

Mol Phylogenet Evol· March 2022

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Genome assembly, annotation, and comparative analysis of the cattail Typha latifolia.
Shane D Widanagama, Joanna R Freeland, Xinwei Xu, Aaron B A Shafer

G3 (Bethesda)· February 2022

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Erratum to "Whole bovine blood use in forensic research: Sample preparation and storage considerations" [Sci. Justice 61 (3) (2021) 214-220].
Amanda Orr, Rebecca Gualdieri, Marie-Laurence Cossette, Aaron B A Shafer, Theresa Stotesbury

Sci Justice· November 2021

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The biogeography of Dromiciops in southern South America: Middle Miocene transgressions, speciation and associations with Nothofagus.
Julian F Quintero-Galvis, Pablo Saenz-Agudelo, Juan L Celis-Diez, Guillermo C Amico, Soledad Vazquez, Aaron B A Shafer

Mol Phylogenet Evol· October 2021

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Author Correction: Determinants of genetic variation across eco-evolutionary scales in pinnipeds.
Claire R Peart, Sergio Tusso, Saurabh D Pophaly, Fidel Botero-Castro, Chi-Chih Wu, Aaron B A Shafer

Nat Ecol Evol· September 2021

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Characterizing the demographic history and prion protein variation to infer susceptibility to chronic wasting disease in a naïve population of white-tailed deer ().
Sarah E Haworth, Larissa Nituch, Joseph M Northrup, Aaron B A Shafer

Evol Appl· June 2021

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Whole bovine blood use in forensic research: Sample preparation and storage considerations.
Amanda Orr, Rebecca Gualdieri, Marie-Laurence Cossette, Aaron B A Shafer, Theresa Stotesbury

Sci Justice· May 2021

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Gut microbiome composition predicts summer core range size in two divergent ungulates.
Jesse F Wolf, Krystal D Kriss, Kara M MacAulay, Keith Munro, Brent R Patterson, Aaron B A Shafer

FEMS Microbiol Ecol· April 2021

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The complexity of co-limitation: nutrigenomics reveal non-additive interactions of calcium and phosphorus on gene expression in .
Catriona L C Jones, Aaron B A Shafer, William D Kim, Clay Prater, Nicole D Wagner

Proc Biol Sci· December 2020

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