Publications by authors named "Adam Abate"

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Myeloid-mesenchymal crosstalk drives ARG1-dependent profibrotic metabolism via ornithine in lung fibrosis.
Preeti Yadav, Javier Gómez Ortega, Prerna Dabral, Whitney Tamaki, Charles Chien, Adam R Abate

J Clin Invest· November 2025

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Tumor heterogeneity underlies clinical outcome and MEK inhibitor response in somatic NF1-mutant glioblastoma.
Sixuan Pan, Kanish Mirchia, Emily Payne, S John Liu, Nadeem Al-Adli, Adam R Abate

JCI Insight· September 2025

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Myeloid-mesenchymal crosstalk drives Arg1-dependent profibrotic metabolism via ornithine in lung fibrosis.
Preeti Yadav, Javier Gómez Ortega, Prerna Dabral, Whitney Tamaki, Charles Chien, Adam R Abate

bioRxiv· July 2025

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Microbiome Single Cell Atlases Generated with a Commercial Instrument.
Xiangpeng Li, Linfeng Xu, Benjamin Demaree, Cecilia Noecker, Jordan E Bisanz, Adam R Abate

Adv Sci (Weinh)· July 2025

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Deterministic Cell Pairing with Simultaneous Microfluidic Merging and Sorting of Droplets.
Kevin M Joslin, Sophia Dateshidze, Seung Won Shin, Adam R Abate, Iain C Clark

bioRxiv· July 2025

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The Immunophenotype and Proviral Landscape of HIV-infected CD4 T Cells During Antiretroviral Therapy.
Cyrille L Delley, Sakshi Shah, Kevin M Joslin, Yujung P Park, Benjamin Demaree, Adam R Abate

bioRxiv· June 2025

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Comprehensive Cross-Domain Taxonomic Classification of Microbiotas using Partitioned Amplification Multiplexed Amplicon Sequencing (PAMA-seq).
Xiangpeng Li, Kai R Trepka, Fangchao Song, Than S Kyaw, Peter J Turnbaugh, Adam R Abate

bioRxiv· June 2025

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High-Throughput Antibody Neutralization Screening in Massively Parallel Droplet Arrays.
Matias Gutierrez-Gonzalez, Ahmed S Fahad, Cyrille L Delley, Cheng-Yu Chung, Shuyan Jin, Adam R Abate

bioRxiv· February 2025

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FIND-seq: high-throughput nucleic acid cytometry for rare single-cell transcriptomics.
Seung Won Shin, Prakriti Mudvari, Shravan Thaploo, Michael A Wheeler, Daniel C Douek, Adam R Abate

Nat Protoc· November 2024

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Multiomic single cell sequencing identifies stemlike nature of mixed phenotype acute leukemia.
Cheryl A C Peretz, Vanessa E Kennedy, Anushka Walia, Cyrille L Delley, Andrew Koh, Adam Abate

Nat Commun· September 2024

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PURE-seq identifies Egr1 as a Potential Master Regulator in Murine Aging by Sequencing Long-Term Hematopoietic Stem Cells.
Adam Abate, Sixuan Pan, Kai-Chun Chang, Inés Fernández-Maestre, Stéphane Haver

Res Sq· August 2024

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PURE-seq identifies as a Potential Master Regulator in Murine Aging by Sequencing Long-Term Hematopoietic Stem Cells.
Sixuan Pan, Kai-Chun Chang, Inés Fernández-Maestre, Stéphane Van Haver, Matthew G Wereski, Adam R Abate

bioRxiv· August 2024

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Microbiome single cell atlases generated with a commercial instrument.
Xiangpeng Li, Linfeng Xu, Benjamin Demaree, Cecilia Noecker, Jordan E Bisanz, Adam R Abate

bioRxiv· March 2024

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Printhead on a chip: empowering droplet-based bioprinting with microfluidics.
Pengfei Zhang, Congying Liu, Cyrus Modavi, Adam Abate, Huawei Chen

Trends Biotechnol· March 2024

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Functional interactions between neurofibromatosis tumor suppressors underlie Schwann cell tumor de-differentiation and treatment resistance.
Harish N Vasudevan, Emily Payne, Cyrille L Delley, S John Liu, Kanish Mirchia, Adam R Abate

Nat Commun· January 2024

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Microfluidics-free single-cell genomics with templated emulsification.
Iain C Clark, Kristina M Fontanez, Robert H Meltzer, Yi Xue, Corey Hayford, Adam R Abate

Nat Biotechnol· November 2023

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Microbiome single cell atlases generated with a commercial instrument.
Adam Abate, Xiangpeng Li, Linfeng Xu, Benjamin Demaree, Cecilia Noecker

Res Sq· September 2023

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Molecular Features of Resected Melanoma Brain Metastases, Clinical Outcomes, and Responses to Immunotherapy.
Harish N Vasudevan, Cyrille Delley, William C Chen, Kanish Mirchia, Sixuan Pan, Adam R Abate

JAMA Netw Open· August 2023

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Viral load quantitation at the point-of-care with shaken digital droplet RT-LAMP.
Daniel W Weisgerber, Krzysztof Langer, Venice Servellita, Peng Xu, Charles Y Chiu, Adam R Abate

Lab Chip· July 2023

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Flow cytometric printing of double emulsions into open droplet arrays.
Pengfei Zhang, Linfeng Xu, Huawei Chen, Adam R Abate

Lab Chip· May 2023

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Multiomic Single Cell Sequencing Identifies Stemlike Nature of Mixed Phenotype Acute Leukemia and Provides Novel Risk Stratification.
Cheryl A C Peretz, Vanessa E Kennedy, Anushka Walia, Cyrille L Delley, Andrew Koh, Adam Abate

bioRxiv· May 2023

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Droplet-based forward genetic screening of astrocyte-microglia cross-talk.
Michael A Wheeler, Iain C Clark, Hong-Gyun Lee, Zhaorong Li, Mathias Linnerbauer, Adam R Abate

Science· March 2023

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Identification of astrocyte regulators by nucleic acid cytometry.
Iain C Clark, Michael A Wheeler, Hong-Gyun Lee, Zhaorong Li, Liliana M Sanmarco, Adam R Abate

Nature· February 2023

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HIV silencing and cell survival signatures in infected T cell reservoirs.
Iain C Clark, Prakriti Mudvari, Shravan Thaploo, Samuel Smith, Mohammad Abu-Laban, Adam R Abate

Nature· February 2023

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