Publications by authors named "Adam D Ewing"

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Human alveolar macrophage function is impaired in tuberculosis contacts with diabetes.
Léanie Kleynhans, Carine Kunsevi-Kilola, Happy Tshivhula, Tariq Webber, Alana Keyser, Adam D Ewing

EBioMedicine· December 2025

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Genomic variation in symptom expression in castrate-resistant prostate cancer.
Janet Hardy, Ristan Greer, Karyn Foster, Niara Oliveira, Phillip Good, Adam D Ewing

BMJ Support Palliat Care· December 2025

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An allele-resolved nanopore-guided tour of the human placental methylome.
Michaela Kindlova, Hannah Byrne, Jade M Kubler, Sarah E Steane, Jessica M Whyte, Adam D Ewing

Nat Commun· November 2025

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HUMAN ALVEOLAR MACROPHAGE FUNCTION IS IMPAIRED IN TUBERCULOSIS CONTACTS WITH DIABETES.
Léanie Kleynhans, Carine Kunsevi-Kilola, Happy Tshivhula, Tariq Webber, Alana Keyser, Adam D Ewing

Res Sq· November 2024

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Molecular genetic analysis of candidate genes for glutaric aciduria type II in a cohort of patients from Queensland, Australia.
Kalliope Demetriou, Janelle Nisbet, David Coman, Adam D Ewing, Liza Phillips

Mol Genet Metab· August 2024

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LINE-1 retrotransposons contribute to mouse PV interneuron development.
Gabriela O Bodea, Juan M Botto, Maria E Ferreiro, Francisco J Sanchez-Luque, Jose de Los Rios Barreda, Adam D Ewing

Nat Neurosci· July 2024

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Locus-resolution analysis of L1 regulation and retrotransposition potential in mouse embryonic development.
Patricia Gerdes, Dorothy Chan, Mischa Lundberg, Francisco J Sanchez-Luque, Gabriela O Bodea, Adam D Ewing

Genome Res· September 2023

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Resolution of Melanoma to Programmed Death-1 Blockade but Simultaneous Rapid Progression of Concomitant Chronic Lymphocytic Leukemia.
Melinda Burgess, Colm Keane, Josh Wd Tobin, Soi C Law, Alison Griffin, Adam D Ewing

Acta Haematol· April 2023

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Retrotransposon instability dominates the acquired mutation landscape of mouse induced pluripotent stem cells.
Patricia Gerdes, Sue Mei Lim, Adam D Ewing, Michael R Larcombe, Dorothy Chan

Nat Commun· December 2022

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Somatic retrotransposition in the developing rhesus macaque brain.
Victor Billon, Francisco J Sanchez-Luque, Jay Rasmussen, Gabriela O Bodea, Daniel J Gerhardt, Adam D Ewing

Genome Res· July 2022

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An early proinflammatory transcriptional response to tau pathology is age-specific and foreshadows reduced tau burden.
Jay Rasmussen, Adam D Ewing, Liviu-Gabriel Bodea, Gabriela O Bodea, Marla Gearing

Brain Pathol· May 2022

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Methylartist: tools for visualizing modified bases from nanopore sequence data.
Seth W Cheetham, Michaela Kindlova, Adam D Ewing

Bioinformatics· May 2022

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A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci.
Elisabeth J van Bree, Rita L F P Guimarães, Mischa Lundberg, Elena R Blujdea, Jimi L Rosenkrantz, Adam D Ewing

Genome Res· April 2022

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No evidence of human genome integration of SARS-CoV-2 found by long-read DNA sequencing.
Nathan Smits, Jay Rasmussen, Gabriela O Bodea, Alberto A Amarilla, Patricia Gerdes, Adam D Ewing

Cell Rep· August 2021

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Microdeletion of 9q22.3: A patient with minimal deletion size associated with a severe phenotype.
Adam D Ewing, Seth W Cheetham, James J McGill, Michael Sharkey, Rick Walker

Am J Med Genet A· July 2021

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Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome.
Robin-Lee Troskie, Yohaann Jafrani, Tim R Mercer, Adam D Ewing, Geoffrey J Faulkner

Genome Biol· May 2021

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Nanopore Sequencing Enables Comprehensive Transposable Element Epigenomic Profiling.
Adam D Ewing, Nathan Smits, Francisco J Sanchez-Luque, Jamila Faivre, Paul M Brennan

Mol Cell· December 2020

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Multiscale imaging of basal cell dynamics in the functionally mature mammary gland.
Alexander J Stevenson, Gilles Vanwalleghem, Teneale A Stewart, Nicholas D Condon, Bethan Lloyd-Lewis, Adam D Ewing

Proc Natl Acad Sci U S A· October 2020

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Whole genome investigation of an atypical autism case identifies a novel mutation with subsequent diagnosis of Kallmann syndrome.
Paul A Dawson, Soohyun Lee, Adam D Ewing, Johannes B Prins, Helen S Heussler

Mol Genet Metab Rep· June 2020

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CDCP1 enhances Wnt signaling in colorectal cancer promoting nuclear localization of β-catenin and E-cadherin.
Yaowu He, Claire M Davies, Brittney S Harrington, Linh Hellmers, Yonghua Sheng, Adam D Ewing

Oncogene· January 2020

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A community effort to create standards for evaluating tumor subclonal reconstruction.
Adriana Salcedo, Maxime Tarabichi, Shadrielle Melijah G Espiritu, Amit G Deshwar, Matei David, Adam D Ewing

Nat Biotechnol· January 2020

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LINE-1 Evasion of Epigenetic Repression in Humans.
Francisco J Sanchez-Luque, Marie-Jeanne H C Kempen, Patricia Gerdes, Dulce B Vargas-Landin, Sandra R Richardson, Adam D Ewing

Mol Cell· August 2019

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Dynamic Methylation of an L1 Transduction Family during Reprogramming and Neurodifferentiation.
Carmen Salvador-Palomeque, Francisco J Sanchez-Luque, Patrick R J Fortuna, Adam D Ewing, Ernst J Wolvetang

Mol Cell Biol· April 2019

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Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection.
Anna Y Lee, Adam D Ewing, Kyle Ellrott, Yin Hu, Kathleen E Houlahan

Genome Biol· November 2018

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L1 Retrotransposon Heterogeneity in Ovarian Tumor Cell Evolution.
Thu H M Nguyen, Patricia E Carreira, Francisco J Sanchez-Luque, Stephanie N Schauer, Allister C Fagg, Adam D Ewing

Cell Rep· June 2018

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