Publications by authors named "Adrien Rieux"

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Evaluating the early diversification of Yersinia pestis and its phylogeographic expansion over 96 years of evolution in Madagascar.
Lovasoa Nomena Randriantseheno, Jason W Sahl, Adrien Rieux, Guillem Mas Fiol, Dawn Birdsell

Commun Biol· November 2025

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New Genomes of pv. from Modern and Historical Material Reveal the History and Genomics of a Neglected Crop Pathogen.
Claudine Boyer, Paola Campos, Nathalie Becker, Lionel Gagnevin, Karine Boyer, Adrien Rieux

Phytopathology· October 2025

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Identification of ESBL-Producing Enterobacterales From Vegetable Plants: Preliminary Findings From a Small Cross-Sectional Study in a Rural Area of Madagascar.
Adrien Rieux, Mamitina Alain Noah Rabenandrasana

Environ Microbiol Rep· June 2025

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New, Complete Circularized Genomes of pv. Produced from Short- and Long-Read Co-Assembly Shed Light on Strains that Emerged a Decade Ago on Mango and Cashew in Burkina Faso.
Claudine Boyer, Pierre Lefeuvre, Cyrille Zombre, Adrien Rieux, Issa Wonni

Phytopathology· January 2025

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Century-old herbarium specimen provides insights into Pierce's disease of grapevines emergence in the Americas.
Monica A Donegan, Alexandra K Kahn, Nathalie Becker, Andreina Castillo Siri, Paola E Campos, Adrien Rieux

Curr Biol· January 2025

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Evolutionary and Epidemiological Insights from Historical and Modern Genomes of pv. , the Causal Agent of Bacterial Leaf Streak of Rice.
Mathilde Hutin, Sara Carpenter, Shivrajani Baruah, Paola Campos, Karine Boyer, Adrien Rieux

Mol Plant Microbe Interact· December 2024

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Emergence and spread of at different geographic scales.
Martial Briand, Alexandra Boccarossa, Adrien Rieux, Marie-Agnès Jacques, Line Ganlanon

Microbiol Spectr· April 2024

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One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar.
Noellie Gay, Mamitina Alain Noah Rabenandrasana, Harielle Prisca Panandiniaina, Marie Florence Rakotoninidrina, Ilo Tsimok'Haja Ramahatafandry, Adrien Rieux

J Antimicrob Chemother· August 2023

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Herbarium specimen sequencing allows precise dating of Xanthomonas citri pv. citri diversification history.
Paola E Campos, Olivier Pruvost, Karine Boyer, Frederic Chiroleu, Thuy Trang Cao, Adrien Rieux

Nat Commun· July 2023

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Phylostems: a new graphical tool to investigate temporal signal of heterochronous sequences datasets.
Anna Doizy, Amaury Prin, Guillaume Cornu, Frederic Chiroleu, Adrien Rieux

Bioinform Adv· March 2023

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Suspicions of two bridgehead invasions of Xylella fastidiosa subsp. multiplex in France.
Enora Dupas, Karine Durand, Adrien Rieux, Martial Briand, Olivier Pruvost

Commun Biol· January 2023

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Contribution of historical herbarium small RNAs to the reconstruction of a cassava mosaic geminivirus evolutionary history.
Adrien Rieux, Paola Campos, Arnaud Duvermy, Sarah Scussel, Darren Martin

Sci Rep· October 2021

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Discriminating lineages of Batrachochytrium dendrobatidis using quantitative PCR.
Pria N Ghosh, Ruhan Verster, Thomas R Sewell, Simon J O'Hanlon, Lola M Brookes, Adrien Rieux

Mol Ecol Resour· July 2021

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First historical genome of a crop bacterial pathogen from herbarium specimen: Insights into citrus canker emergence.
Paola E Campos, Clara Groot Crego, Karine Boyer, Myriam Gaudeul, Claudia Baider, Adrien Rieux

PLoS Pathog· July 2021

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Time-calibrated genomic evolution of a monomorphic bacterium during its establishment as an endemic crop pathogen.
Damien Richard, Olivier Pruvost, François Balloux, Claudine Boyer, Adrien Rieux

Mol Ecol· April 2021

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Contrasting genetic diversity and structure among Malagasy Ralstonia pseudosolanacearum phylotype I populations inferred from an optimized Multilocus Variable Number of Tandem Repeat Analysis scheme.
Hasina Rasoamanana, Santatra Ravelomanantsoa, Noura Yahiaoui, Niry Dianzinga, Emeline Rébert, Adrien Rieux

PLoS One· January 2021

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Draft Genome Sequences of 284 Xanthomonas citri pv. citri Strains Causing Asiatic Citrus Canker.
Damien Richard, Adrien Rieux, Pierre Lefeuvre, Azali Hamza, Kanta Kumar Lobin

Microbiol Resour Announc· January 2021

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Development and comparative validation of genomic-driven PCR-based assays to detect Xanthomonas citri pv. citri in citrus plants.
Isabelle Robène, Véronique Maillot-Lebon, Aude Chabirand, Aurélie Moreau, Nathalie Becker, Adrien Rieux

BMC Microbiol· October 2020

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Genomic Acquisitions in Emerging Populations of pv. Infecting Corn in the United States and Argentina.
Alvaro L Perez-Quintero, Mary Ortiz-Castro, Jillian M Lang, Adrien Rieux, Guangxi Wu

Phytopathology· June 2020

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Plasmodium vivax Malaria Viewed through the Lens of an Eradicated European Strain.
Lucy van Dorp, Pere Gelabert, Adrien Rieux, Marc de Manuel, Toni de-Dios

Mol Biol Evol· March 2020

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Population structure, connectivity, and demographic history of an apex marine predator, the bull shark .
Agathe Pirog, Virginie Ravigné, Michaël C Fontaine, Adrien Rieux, Aude Gilabert

Ecol Evol· December 2019

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Genomic Diversity and Recombination among Xylella fastidiosa Subspecies.
Mathieu Vanhove, Adam C Retchless, Anne Sicard, Adrien Rieux, Helvecio D Coletta-Filho

Appl Environ Microbiol· July 2019

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Recent Asian origin of chytrid fungi causing global amphibian declines.
Simon J O'Hanlon, Adrien Rieux, Rhys A Farrer, Gonçalo M Rosa, Bruce Waldman

Science· May 2018

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Coexistence of Multiple Endemic and Pandemic Lineages of the Rice Blast Pathogen.
Pierre Gladieux, Sébastien Ravel, Adrien Rieux, Sandrine Cros-Arteil, Henri Adreit

mBio· April 2018

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The global distribution and spread of the mobilized colistin resistance gene mcr-1.
Ruobing Wang, Lucy van Dorp, Liam P Shaw, Phelim Bradley, Qi Wang, Adrien Rieux

Nat Commun· March 2018

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