Publications by authors named "Alan Filipski"

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Phylogenetic placement of metagenomic reads using the minimum evolution principle.
Alan Filipski, Koichiro Tamura, Paul Billing-Ross, Oscar Murillo, Sudhir Kumar

BMC Genomics· January 2016

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A Protocol for Diagnosing the Effect of Calibration Priors on Posterior Time Estimates: A Case Study for the Cambrian Explosion of Animal Phyla.
Fabia U Battistuzzi, Paul Billing-Ross, Oscar Murillo, Alan Filipski, Sudhir Kumar

Mol Biol Evol· July 2015

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Prospects for building large timetrees using molecular data with incomplete gene coverage among species.
Alan Filipski, Oscar Murillo, Anna Freydenzon, Koichiro Tamura, Sudhir Kumar

Mol Biol Evol· September 2014

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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.
Koichiro Tamura, Glen Stecher, Daniel Peterson, Alan Filipski, Sudhir Kumar

Mol Biol Evol· December 2013

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Estimating divergence times in large molecular phylogenies.
Koichiro Tamura, Fabia Ursula Battistuzzi, Paul Billing-Ross, Oscar Murillo, Alan Filipski

Proc Natl Acad Sci U S A· November 2012

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Statistics and truth in phylogenomics.
Sudhir Kumar, Alan J Filipski, Fabia U Battistuzzi, Sergei L Kosakovsky Pond, Koichiro Tamura

Mol Biol Evol· February 2012

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Phylomedicine: an evolutionary telescope to explore and diagnose the universe of disease mutations.
Sudhir Kumar, Joel T Dudley, Alan Filipski, Li Liu

Trends Genet· September 2011

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Performance of relaxed-clock methods in estimating evolutionary divergence times and their credibility intervals.
Fabia U Battistuzzi, Alan Filipski, S Blair Hedges, Sudhir Kumar

Mol Biol Evol· June 2010

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Positional conservation and amino acids shape the correct diagnosis and population frequencies of benign and damaging personal amino acid mutations.
Sudhir Kumar, Michael P Suleski, Glenn J Markov, Simon Lawrence, Antonio Marco, Alan J Filipski

Genome Res· September 2009

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Evolution of genes and genomes on the Drosophila phylogeny.

Nature· November 2007

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Multiple sequence alignment: in pursuit of homologous DNA positions.
Sudhir Kumar, Alan Filipski

Genome Res· February 2007

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Placing confidence limits on the molecular age of the human-chimpanzee divergence.
Sudhir Kumar, Alan Filipski, Vinod Swarna, Alan Walker, S Blair Hedges

Proc Natl Acad Sci U S A· December 2005

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Measuring conservation of contiguous sets of autosomal markers on bovine and porcine genomes in relation to the map of the human genome.
Zhihua Jiang, Jenna S Melville, Honghe Cao, Sudhir Kumar, Alan Filipski

Genome· August 2002

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