Publications by authors named "Alan Medlar"

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Metatranscriptomic assessment of burn wound infection clearance.
Teija Ojala, Andrew Lindford, Kirsi Savijoki, Heli Lagus, Jenni Tommila, Alan Medlar

Clin Microbiol Infect· January 2021

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TRAP1 chaperone protein mutations and autoinflammation.
Ariane Si Standing, Ying Hong, Coro Paisan-Ruiz, Ebun Omoyinmi, Alan Medlar

Life Sci Alliance· February 2020

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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.
Naihui Zhou, Yuxiang Jiang, Timothy R Bergquist, Alexandra J Lee, Balint Z Kacsoh, Alan J Medlar

Genome Biol· November 2019

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PANNZER2: a rapid functional annotation web server.
Petri Törönen, Alan Medlar, Liisa Holm

Nucleic Acids Res· July 2018

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AAI-profiler: fast proteome-wide exploratory analysis reveals taxonomic identity, misclassification and contamination.
Alan J Medlar, Petri Törönen, Liisa Holm

Nucleic Acids Res· July 2018

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TOPAZ: asymmetric suffix array neighbourhood search for massive protein databases.
Alan Medlar, Liisa Holm

BMC Bioinformatics· July 2018

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Opportunities and challenges in metabarcoding approaches for helminth community identification in wild mammals.
Tuomas Aivelo, Alan Medlar

Parasitology· April 2018

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HaploForge: a comprehensive pedigree drawing and haplotype visualization web application.
Mehmet Tekman, Alan Medlar, Monika Mozere, Robert Kleta, Horia Stanescu

Bioinformatics· December 2017

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Autoinflammatory periodic fever, immunodeficiency, and thrombocytopenia (PFIT) caused by mutation in actin-regulatory gene WDR1.
Ariane S I Standing, Dessislava Malinova, Ying Hong, Julien Record, Dale Moulding, Alan Medlar

J Exp Med· January 2017

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Robust multi-group gene set analysis with few replicates.
Pashupati P Mishra, Alan Medlar, Liisa Holm, Petri Törönen

BMC Bioinformatics· December 2016

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Wasabi: An Integrated Platform for Evolutionary Sequence Analysis and Data Visualization.
Andres Veidenberg, Alan Medlar, Ari Löytynoja

Mol Biol Evol· April 2016

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Tracking year-to-year changes in intestinal nematode communities of rufous mouse lemurs (Microcebus rufus).
Tuomas Aivelo, Alan Medlar, Ari Löytynoja, Juha Laakkonen, Jukka Jernvall

Parasitology· July 2015

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Séance: reference-based phylogenetic analysis for 18S rRNA studies.
Alan Medlar, Tuomas Aivelo, Ari Löytynoja

BMC Evol Biol· November 2014

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Nephrocalcinosis (enamel renal syndrome) caused by autosomal recessive FAM20A mutations.
Graciana Jaureguiberry, Muriel De la Dure-Molla, David Parry, Mickael Quentric, Nina Himmerkus, Alan J Medlar

Nephron Physiol· October 2013

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Mutations in the autoregulatory domain of β-tubulin 4a cause hereditary dystonia.
Joshua Hersheson, Niccolo E Mencacci, Mary Davis, Nicola MacDonald, Daniah Trabzuni, Alan J Medlar

Ann Neurol· April 2013

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Phospholipase A2 receptor (PLA2R1) sequence variants in idiopathic membranous nephropathy.
Marieke J H Coenen, Julia M Hofstra, Hanna Debiec, Horia C Stanescu, Alan J Medlar

J Am Soc Nephrol· March 2013

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SwiftLink: parallel MCMC linkage analysis using multicore CPU and GPU.
Alan Medlar, Dorota Głowacka, Horia Stanescu, Kevin Bryson, Robert Kleta

Bioinformatics· February 2013

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Genetic testing in renal disease.
Detlef Bockenhauer, Alan J Medlar, Emma Ashton, Robert Kleta, Nick Lench

Pediatr Nephrol· June 2012

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Risk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy.
Horia C Stanescu, Mauricio Arcos-Burgos, Alan Medlar, Detlef Bockenhauer, Anna Kottgen

N Engl J Med· February 2011

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Cystinosis and mickey mouse.
Alan Medlar, Robert Kleta

Nephrol Dial Transplant· April 2010

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