Publications by authors named "Alex Di Genova"

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Production of polyhydroxyalkanoates by Halomonas sp. HG01, a halophilic bacterium from northern Peru, using various carbon sources: metabolic and genomic analysis.
César W Guzmán-Moreno, Juliana Cardinali-Rezende, Alex Di Genova, Mariana Ferrarini, Marie-France Sagot

Int J Biol Macromol· December 2025

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Genome-resolved metagenomics and evolutionary analysis reveal conserved metabolic adaptations in extremophile communities from a copper mining tailing.
Moises A Rojas, Gladis Serrano, Jorge Torres, Jaime Ortega, Gabriel Gálvez, Alex Di Genova

Environ Microbiome· December 2025

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A recent and rapid genome expansion driven by the amplification of transposable elements in the Neotropical annual killifish Garcialebias charrua.
Felipe Gajardo-Escobar, Camilo Valdivieso, Alex Di Genova, Luisa Pereiro, Maria Jose Arezo

Biol Res· November 2025

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Impact of Amerindian ancestry on clinical outcomes in Crohn's disease and ulcerative colitis in a Latino population.
Tamara Pérez-Jeldres, María Leonor Bustamante, Danilo Alvares, Manuel Alvarez-Lobos, Lajos Kalmer, Di Genova Alex

Sci Rep· May 2025

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The genome and its giant Y chromosome.
Carol Moraga, Catarina Branco, Quentin Rougemont, Pavel Jedlička, Eddy Mendoza-Galindo, Alex Di Genova

Science· February 2025

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Expression and Clinical Outcome in Pulmonary Carcinoids.
Lisa Werr, Christoph Bartenhagen, Carolina Rosswog, Maria Cartolano, Catherine Voegele, Alex Di Genova

J Clin Oncol· January 2025

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Genomes of the Orestias pupfish from the Andean Altiplano shed light on their evolutionary history and phylogenetic relationships within Cyprinodontiformes.
Pamela Morales, Felipe Gajardo, Camilo Valdivieso, Moisés A Valladares, Alex Di Genova

BMC Genomics· June 2024

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Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
Lise Mangiante, Nicolas Alcala, Alexandra Sexton-Oates, Alex Di Genova, Abel Gonzalez-Perez

Nat Genet· April 2023

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Editorial: Applications of biological networks in biomedicine.
Vinicius Maracaja-Coutinho, Alex Di Genova, Anne Siegel, Mauricio Latorre

Front Mol Biosci· January 2023

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A molecular phenotypic map of malignant pleural mesothelioma.
Alex Di Genova, Lise Mangiante, Alexandra Sexton-Oates, Catherine Voegele, Lynnette Fernandez-Cuesta

Gigascience· December 2022

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Genome sequencing and transcriptomic analysis of the Andean killifish Orestias ascotanensis reveals adaptation to high-altitude aquatic life.
Alex Di Genova, Gino Nardocci, Rodrigo Maldonado-Agurto, Christian Hodar, Camilo Valdivieso

Genomics· January 2022

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The transposable element-rich genome of the cereal pest Sitophilus oryzae.
Nicolas Parisot, Carlos Vargas-Chávez, Clément Goubert, Patrice Baa-Puyoulet, Séverine Balmand, Alex Di Genova

BMC Biol· November 2021

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Efficient hybrid de novo assembly of human genomes with WENGAN.
Alex Di Genova, Elena Buena-Atienza, Stephan Ossowski, Marie-France Sagot

Nat Biotechnol· April 2021

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The relevance of enzyme specificity for coenzymes and the presence of 6-phosphogluconate dehydrogenase for polyhydroxyalkanoates production in the metabolism of Pseudomonas sp. LFM046.
Juliana Cardinali-Rezende, Alex Di Genova, Rafael A T P S Nahat, Alexander Steinbüchel, Marie-France Sagot

Int J Biol Macromol· November 2020

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Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches.
Claudia Muñoz-Espinoza, Alex Di Genova, Alicia Sánchez, José Correa, Alonso Espinoza

BMC Plant Biol· August 2020

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Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells.
Scheila G Mucha, Mariana G Ferrarini, Carol Moraga, Alex Di Genova, Laurent Guyon

Sci Rep· August 2020

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Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes Aymara and Mapuche components.
Ricardo A Verdugo, Alex Di Genova, Luisa Herrera, Mauricio Moraga, Mónica Acuña

Biol Res· April 2020

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Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans.
Elena A Vidal, Tomás C Moyano, Bernabé I Bustos, Eduardo Pérez-Palma, Carol Moraga, Alex Di Genova

Sci Rep· February 2019

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Comparing genomic signatures of domestication in two Atlantic salmon ( L.) populations with different geographical origins.
Maria E López, Laura Benestan, Jean-Sebastien Moore, Charles Perrier, John Gilbey, Alex Di Genova

Evol Appl· January 2019

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Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon.
Shawn R Narum, Alex Di Genova, Steven J Micheletti, Alejandro Maass

Proc Biol Sci· July 2018

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Fast-SG: an alignment-free algorithm for hybrid assembly.
Alex Di Genova, Gonzalo A Ruz, Marie-France Sagot, Alejandro Maass

Gigascience· May 2018

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The genome sequence of the soft-rot fungus reveals a high gene dosage for lignocellulolytic enzymes.
Wladimir Mardones, Alex Di Genova, María Paz Cortés, Dante Travisany, Alejandro Maass

Mycology· January 2018

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Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production.
Nicolás Loira, Sebastian Mendoza, María Paz Cortés, Natalia Rojas, Dante Travisany, Alex Di Genova

BMC Syst Biol· July 2017

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Global gene expression analysis provides insight into local adaptation to geothermal streams in tadpoles of the Andean toad Rhinella spinulosa.
Luis Pastenes, Camilo Valdivieso, Alex Di Genova, Dante Travisany, Andrew Hart

Sci Rep· May 2017

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The bioleaching potential of a bacterial consortium.
Mauricio Latorre, María Paz Cortés, Dante Travisany, Alex Di Genova, Marko Budinich

Bioresour Technol· October 2016

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