Publications by authors named "Alex Dobin"

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The ENCODE Uniform Analysis Pipelines.
Benjamin C Hitz, Jin-Wook Lee, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Alex Dobin

Res Sq· July 2023

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The ENCODE Uniform Analysis Pipelines.
Benjamin C Hitz, Lee Jin-Wook, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Alex Dobin

bioRxiv· April 2023

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Dynamics of microRNA expression during mouse prenatal development.
Sorena Rahmanian, Rabi Murad, Alessandra Breschi, Weihua Zeng, Mark Mackiewicz, Alex Dobin

Genome Res· November 2019

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Gene-specific patterns of expression variation across organs and species.
Alessandra Breschi, Sarah Djebali, Jesse Gillis, Dmitri D Pervouchine, Alex Dobin

Genome Biol· July 2016

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Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression.
Dmitri D Pervouchine, Sarah Djebali, Alessandra Breschi, Carrie A Davis, Pablo Prieto Barja, Alex Dobin

Nat Commun· January 2015

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A comparative encyclopedia of DNA elements in the mouse genome.
Feng Yue, Yong Cheng, Alessandra Breschi, Jeff Vierstra, Weisheng Wu, Alex Dobin

Nature· November 2014

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Comparative analysis of the transcriptome across distant species.
Mark B Gerstein, Joel Rozowsky, Koon-Kiu Yan, Daifeng Wang, Chao Cheng, Alex Dobin

Nature· August 2014

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Landscape of transcription in human cells.
Sarah Djebali, Carrie A Davis, Angelika Merkel, Alex Dobin, Timo Lassmann

Nature· September 2012

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An encyclopedia of mouse DNA elements (Mouse ENCODE).

Genome Biol· August 2012

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Evidence for transcript networks composed of chimeric RNAs in human cells.
Sarah Djebali, Julien Lagarde, Philipp Kapranov, Vincent Lacroix, Christelle Borel, Alex Dobin

PLoS One· May 2012

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The developmental transcriptome of Drosophila melanogaster.
Brenton R Graveley, Angela N Brooks, Joseph W Carlson, Michael O Duff, Jane M Landolin, Alex Dobin

Nature· March 2011

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