Publications by authors named "Alexander Alekseyenko"

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Oral microbial profiles in young adults with cannabis use disorder.
Brittney D Browning, Rachel L Tomko, Anna E Kirkland, Rachel Visontay, Pamela L Ferguson, Alexander V Alekseyenko

Drug Alcohol Depend· October 2025

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The role of built and social environments in Alzheimer's disease dementia prevalence in the United States: A machine learning approach.
Mackenzie Kramer, Alexander V Alekseyenko, Abe Mollalo

J Alzheimers Dis· October 2025

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Ceramide-Induced Metabolic Stress Depletes Fumarate and Drives Mitophagy to Mediate Tumor Suppression.
Natalia V Oleinik, Firdevs Cansu Atilgan, Mohamed Faisal Kassir, Han Gyul Lee, Alhaji H Janneh, Alexander V Alekseyenko

Cancer Res· September 2025

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Using Real-World Data on Depression from EHR-based Research Networks: A Scoping Review.
Yujia Sun, Dmitry Scherbakov, Gaylen Fronk, Leigh Ridings, Alexander V Alekseyenko

Res Sq· August 2025

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Tissue gene expression analysis approach in a context of high technical and biological heterogeneity.
Evan Bagley, Souvik Seal, Lauren R Fanning, Jean-Sebastien Anoma, Tami Crawford, Alexander V Alekseyenko

BMC Res Notes· July 2025

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Preliminary associations between brain metabolites and oral microbiome profiles during adolescence.
Brittney D Browning, Anna E Kirkland, Maria I Perica, Melinda A Engevik, Alexander V Alekseyenko

Sci Rep· July 2025

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Classifying Stereotactic Radiosurgery Patients by Primary Diagnosis Using Natural Language Processing of Clinical Notes.
Mario Fugal, David Marshall, Alexander V Alekseyenko, Xia Jing, Graham Warren

JCO Clin Cancer Inform· June 2025

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Clinical Significance of Marital Status and Changes in Status Extracted from Unstructured Clinical Notes Using Ensembles of Off-the-Shelf Extraction Models.
Dmitry A Scherbakov, Paul M Heider, Jihad S Obeid, Alexander V Alekseyenko, Leslie A Lenert

Res Sq· May 2025

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Alzheimer's Disease Dementia Prevalence in the United States: A County-Level Spatial Machine Learning Analysis.
Abolfazl Mollalo, George Grekousis, Hermes Florez, Brian Neelon, Leslie A Lenert, Alexander V Alekseyenko

Am J Alzheimers Dis Other Demen· April 2025

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Tissue gene expression analysis approach in a context of high technical and biological heterogeneity.
Evan Bagley, Souvik Seal, Lauren R Fanning, Jean-Sebastian Anoma, Tami Crawford, Alexander V Alekseyenko

Res Sq· April 2025

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Machine learning in healthcare citizen science: A scoping review.
Ranga Baminiwatte, Blessing Torsu, Dmitry Scherbakov, Abolfazl Mollalo, Jihad S Obeid, Alexander V Alekseyenko

Int J Med Inform· March 2025

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Rural-urban disparities of Alzheimer's disease and related dementias: A scoping review.
Mackenzie Kramer, Maxwell Cutty, Sara Knox, Alexander V Alekseyenko, Abolfazl Mollalo

Alzheimers Dement (N Y)· February 2025

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Using large language models for extracting stressful life events to assess their impact on preventive colon cancer screening adherence.
Dmitry Scherbakov, Paul M Heider, Ramsey Wehbe, Alexander V Alekseyenko, Leslie A Lenert

BMC Public Health· January 2025

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Natural Language Processing and Social Determinants of Health in Mental Health Research: AI-Assisted Scoping Review.
Dmitry A Scherbakov, Nina C Hubig, Leslie A Lenert, Alexander V Alekseyenko, Jihad S Obeid

JMIR Ment Health· January 2025

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The Chemistry of Phytoplankton.
Xiaoying Liu, Zhiwei Bian, Shian Hu, Cody F Dickinson, Menny M Benjamin, Alexander Alekseyenko

Chem Rev· December 2024

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Application of Intersectionality Framework andArea-level Indicators in Machine Learning Analysisof Depression Disparities in All of Us ResearchProgram Data.
Dmitry Scherbakov, Michael T Marrone, Leslie A Lenert, Alexander V Alekseyenko

Res Sq· December 2024

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Application of Spatial Analysis on Electronic Health Records to Characterize Patient Phenotypes: Systematic Review.
Abolfazl Mollalo, Bashir Hamidi, Leslie A Lenert, Alexander V Alekseyenko

JMIR Med Inform· October 2024

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Adolescent alcohol use is associated with differences in the diversity and composition of the oral microbiome.
Brittney D Browning, Anna E Kirkland, Rejoyce Green, Helen Liu, Janiece S Glover, Alexander V Alekseyenko

Alcohol Clin Exp Res (Hoboken)· June 2024

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MD3F: Multivariate Distance Drift Diffusion Framework for High-Dimensional Datasets.
Jessica Zielinski, Patricia Corby, Alexander V Alekseyenko

Genes (Basel)· May 2024

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SpaceANOVA: Spatial Co-occurrence Analysis of Cell Types in Multiplex Imaging Data Using Point Process and Functional ANOVA.
Souvik Seal, Brian Neelon, Peggi M Angel, Elizabeth C O'Quinn, Elizabeth Hill, Alexander V Alekseyenko

J Proteome Res· April 2024

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County Mammogram Uptake can be Predicted from Social Determinants of Health, but Patterns Do Not Hold for Individual Patients.
Matthew Davis, Kit Simpson, Vanessa Diaz, Alexander V Alekseyenko

Fortune J Health Sci· March 2024

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Application of Spatial Analysis for Electronic Health Records: Characterizing Patient Phenotypes and Emerging Trends.
Abolfazl Mollalo, Bashir Hamidi, Leslie Lenert, Alexander V Alekseyenko

Res Sq· January 2024

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Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup.
Nephi A Walton, Radha Nagarajan, Chen Wang, Murat Sincan, Robert R Freimuth, Alexander V Alekseyenko

J Am Med Inform Assoc· January 2024

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Predicting Mammogram Screening Follow Through with Electronic Health Record and Geographically Linked Data.
Matthew Davis, Kit Simpson, Leslie A Lenert, Vanessa Diaz, Alexander V Alekseyenko

Cancer Res Commun· October 2023

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The hidden microbiome of hospital infection surveillance testing: biomarkers of health outcomes in MRSA and VRE colonization.
Bashir Hamidi, Lisa L Steed, Scott R Curry, Cassandra D Salgado, Alexander V Alekseyenko

Res Sq· August 2023

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