Publications by authors named "Alexander Botzki"

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Staying on track - Keeping things running in a high-end scientific imaging core facility.
Oliver Renaud, Nathalie Aulner, Audrey Salles, Nadia Halidi, Maia Brunstein, Alexander Botzki

J Microsc· June 2024

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Systematic review and meta-analysis of genome-wide pooled CRISPR screens to identify host factors involved in influenza A virus infection.
Annabel Maes, Alexander Botzki, Janick Mathys, Francis Impens, Xavier Saelens

J Virol· May 2024

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The antigenic landscape of human influenza N2 neuraminidases from 2009 until 2017.
João Paulo Portela Catani, Anouk Smet, Tine Ysenbaert, Marnik Vuylsteke, Guy Bottu, Alexander Botzki

Elife· May 2024

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Predicting and improving complex beer flavor through machine learning.
Michiel Schreurs, Supinya Piampongsant, Miguel Roncoroni, Lloyd Cool, Beatriz Herrera-Malaver, Alexander Botzki

Nat Commun· March 2024

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What we can learn from deep space communication for reproducible bioimaging and data analysis.
Tatiana Woller, Christopher J Cawthorne, Romain Raymond Agnes Slootmaekers, Ingrid Barcena Roig, Alexander Botzki

Mol Syst Biol· January 2024

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SNPeffect 5.0: large-scale structural phenotyping of protein coding variants extracted from next-generation sequencing data using AlphaFold models.
Kobe Janssen, Ramon Duran-Romaña, Guy Bottu, Mainak Guharoy, Alexander Botzki

BMC Bioinformatics· July 2023

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Making Bioinformatics Training Events and Material More Discoverable Using TeSS, the ELIXIR Training Portal.
Finn Bacall, Aitor Apaolaza, Munazah Andrabi, Chris Child, Carole Goble, Alexander Botzki

Curr Protoc· February 2023

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Acinetobase: the comprehensive database and repository of Acinetobacter strains.
Adam Valcek, James Collier, Alexander Botzki, Charles Van der Henst

Database (Oxford)· November 2022

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ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation.
Richard de Reuver, Simon Verdonck, Evelien Dierick, Josephine Nemegeer, Eline Hessmann, Alexander Botzki

Nature· July 2022

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How tech-savvy employees make the difference in core facilities: Recognizing core facility expertise with dedicated career tracks: Recognizing core facility expertise with dedicated career tracks.
Saskia Lippens, Dominique Audenaert, Alexander Botzki, Stefaan Derveaux, Bart Ghesquière

EMBO Rep· June 2022

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Unipept Visualizations: an interactive visualization library for biological data.
Pieter Verschaffelt, James Collier, Alexander Botzki, Lennart Martens, Peter Dawyndt

Bioinformatics· January 2022

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PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants.
Michiel Van Bel, Francesca Silvestri, Eric M Weitz, Lukasz Kreft, Alexander Botzki

Nucleic Acids Res· January 2022

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TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes.
François Bucchini, Andrea Del Cortona, Łukasz Kreft, Alexander Botzki, Michiel Van Bel

Nucleic Acids Res· September 2021

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ADAR1 interaction with Z-RNA promotes editing of endogenous double-stranded RNA and prevents MDA5-dependent immune activation.
Richard de Reuver, Evelien Dierick, Bartosz Wiernicki, Katrien Staes, Leen Seys, Alexander Botzki

Cell Rep· August 2021

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AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data.
Carlos P Roca, Oliver T Burton, Václav Gergelits, Teresa Prezzemolo, Carly E Whyte, Alexander Botzki

Nat Commun· May 2021

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Navigating the Global Protein-Protein Interaction Landscape Using iRefWeb.
Andrei L Turinsky, Sam Dupont, Alexander Botzki, Sabry Razick, Brian Turner

Methods Mol Biol· March 2021

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A framework to assess the quality and impact of bioinformatics training across ELIXIR.
Kim T Gurwitz, Prakash Singh Gaur, Louisa J Bellis, Lee Larcombe, Eva Alloza, Alexander Botzki

PLoS Comput Biol· July 2020

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Protein Homeostasis Database: protein quality control in E.coli.
Reshmi Ramakrishnan, Bert Houben, Łukasz Kreft, Alexander Botzki, Joost Schymkowitz

Bioinformatics· February 2020

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The Plant PTM Viewer, a central resource for exploring plant protein modifications.
Patrick Willems, Alison Horne, Thomas Van Parys, Sofie Goormachtig, Ive De Smet, Alexander Botzki

Plant J· August 2019

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Scop3D: Online Visualization of Mutation Rates on Protein Structure.
Lukasz Kreft, Demet Turan, Niels Hulstaert, Alexander Botzki, Lennart Martens

J Proteome Res· February 2019

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The TriForC database: a comprehensive up-to-date resource of plant triterpene biosynthesis.
Karel Miettinen, Sabrina Iñigo, Lukasz Kreft, Jacob Pollier, Christof De Bo, Alexander Botzki

Nucleic Acids Res· January 2018

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PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics.
Michiel Van Bel, Tim Diels, Emmelien Vancaester, Lukasz Kreft, Alexander Botzki

Nucleic Acids Res· January 2018

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PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization.
Lukasz Kreft, Alexander Botzki, Frederik Coppens, Klaas Vandepoele, Michiel Van Bel

Bioinformatics· September 2017

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ConTra v3: a tool to identify transcription factor binding sites across species, update 2017.
Lukasz Kreft, Arne Soete, Paco Hulpiau, Alexander Botzki, Yvan Saeys

Nucleic Acids Res· July 2017

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Design of benzimidazole- and benzoxazole-2-thione derivatives as inhibitors of bacterial hyaluronan lyase.
Stephan Braun, Alexander Botzki, Sunnhild Salmen, Christian Textor, Günther Bernhardt

Eur J Med Chem· September 2011

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