Publications by authors named "Alexander Mirzoev"

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Multiscale modeling reveals the ion-mediated phase separation of nucleosome core particles.
Tiedong Sun, Nikolay Korolev, Vishal Minhas, Alexander Mirzoev, Alexander P Lyubartsev

Biophys J· June 2024

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A Bottom-Up Coarse-Grained Model for Nucleosome-Nucleosome Interactions with Explicit Ions.
Tiedong Sun, Vishal Minhas, Alexander Mirzoev, Nikolay Korolev, Alexander P Lyubartsev

J Chem Theory Comput· June 2022

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Bottom-Up Coarse-Grained Modeling of DNA.
Tiedong Sun, Vishal Minhas, Nikolay Korolev, Alexander Mirzoev, Alexander P Lyubartsev

Front Mol Biosci· March 2021

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Modeling DNA Flexibility: Comparison of Force Fields from Atomistic to Multiscale Levels.
Vishal Minhas, Tiedong Sun, Alexander Mirzoev, Nikolay Korolev, Alexander P Lyubartsev

J Phys Chem B· January 2020

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A multiscale analysis of DNA phase separation: from atomistic to mesoscale level.
Tiedong Sun, Alexander Mirzoev, Vishal Minhas, Nikolay Korolev, Alexander P Lyubartsev

Nucleic Acids Res· June 2019

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Multiscale Modelling of Bionano Interface.
Hender Lopez, Erik G Brandt, Alexander Mirzoev, Dmitry Zhurkin, Alexander Lyubartsev

Adv Exp Med Biol· October 2017

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All-Atom MD Simulation of DNA Condensation Using Ab Initio Derived Force Field Parameters of Cobalt(III)-Hexammine.
Tiedong Sun, Alexander Mirzoev, Nikolay Korolev, Alexander P Lyubartsev, Lars Nordenskiöld

J Phys Chem B· August 2017

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Systematic implicit solvent coarse graining of dimyristoylphosphatidylcholine lipids.
Alexander Mirzoev, Alexander P Lyubartsev

J Comput Chem· June 2014

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MagiC: Software Package for Multiscale Modeling.
Alexander Mirzoev, Alexander P Lyubartsev

J Chem Theory Comput· March 2013

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Circadian profiles of focal epileptic seizures: a need for reappraisal.
Alexander Mirzoev, Eduard Bercovici, Lee S Stewart, Miguel A Cortez, O Carter Snead

Seizure· July 2012

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Effective solvent mediated potentials of Na+ and Cl- ions in aqueous solution: temperature dependence.
Alexander Mirzoev, Alexander P Lyubartsev

Phys Chem Chem Phys· April 2011

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Molecular dynamics investigation of dipeptide-transition metal salts in aqueous solutions.
M S Santosh, Alexander P Lyubartsev, Alexander A Mirzoev, D Krishna Bhat

J Phys Chem B· December 2010

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Systematic coarse-graining of molecular models by the Newton inversion method.
Alexander Lyubartsev, Alexander Mirzoev, LiJun Chen, Aatto Laaksonen

Faraday Discuss· March 2010

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