Publications by authors named "Alexander Nagy"

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Genetic data and meteorological conditions suggesting windborne transmission of H5N1 high-pathogenicity avian influenza between commercial poultry outbreaks.
Alexander Nagy, Lenka Černíková, Kamil Sedlák

PLoS One· September 2025

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Genesis and Spread of Novel Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus Genotype EA-2023-DG Reassortant, Western Europe.
Steven Van Borm, Ann Kathrin Ahrens, Claudia Bachofen, Ashley C Banyard, Cathrine Arnason Bøe, Alexander Nagy

Emerg Infect Dis· June 2025

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Developing molecular surveillance of SARS-CoV-2 in the Czech Republic (2021-2022).
Timotej Šúri, Lucie Pfeiferová, Matěj Bezdíček, Jan Svatoň, Vladimír Hampl, Alexander Nagy

Sci Rep· June 2025

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High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe-Why trends of virus evolution are more difficult to predict.
Alice Fusaro, Bianca Zecchin, Edoardo Giussani, Elisa Palumbo, Montserrat Agüero-García, Alexander Nagy

Virus Evol· April 2024

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Enzootic Circulation, Massive Gull Mortality and Poultry Outbreaks during the 2022/2023 High-Pathogenicity Avian Influenza H5N1 Season in the Czech Republic.
Alexander Nagy, Martina Stará, Lenka Černíková, Eliška Kličková, Ondřej Horák

Viruses· January 2024

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Genotype Diversity, Wild Bird-to-Poultry Transmissions, and Farm-to-Farm Carryover during the Spread of the Highly Pathogenic Avian Influenza H5N1 in the Czech Republic in 2021/2022.
Alexander Nagy, Martina Stará, Lenka Černíková, Lada Hofmannová, Kamil Sedlák

Viruses· January 2023

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Reverse-zoonotic transmission of SARS-CoV-2 lineage alpha (B.1.1.7) to great apes and exotic felids in a zoo in the Czech Republic.
Alexander Nagy, Martina Stará, Roman Vodička, Lenka Černíková, Helena Jiřincová

Arch Virol· August 2022

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Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021.
Anne Pohlmann, Jacqueline King, Alice Fusaro, Bianca Zecchin, Ashley C Banyard, Alexander Nagy

mBio· August 2022

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Retrospective Analysis Revealed an April Occurrence of Monkeypox in the Czech Republic.
Martin Chmel, Oldřich Bartoš, Hana Kabíčková, Petr Pajer, Pavla Kubíčková, Alexander Nagy

Viruses· August 2022

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A new clade 2.3.4.4b H5N1 highly pathogenic avian influenza genotype detected in Europe in 2021.
Alexander Nagy, Lenka Černíková, Martina Stará

Arch Virol· June 2022

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Genotype Uniformity, Wild Bird-to-Poultry Transmissions, and Farm-to-Farm Carryover during the Spread of the Highly Pathogenic Avian Influenza H5N8 in the Czech Republic in 2021.
Alexander Nagy, Lenka Černíková, Martina Stará, Lada Hofmannová, Kamil Sedlák

Viruses· June 2022

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A universal RT-qPCR assay for "One Health" detection of influenza A viruses.
Alexander Nagy, Lenka Černíková, Kateřina Kunteová, Zuzana Dirbáková, Saumya S Thomas

PLoS One· May 2021

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In silico re-assessment of a diagnostic RT-qPCR assay for universal detection of Influenza A viruses.
Alexander Nagy, Tomáš Jiřinec, Helena Jiřincová, Lenka Černíková, Martina Havlíčková

Sci Rep· February 2019

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Circulation of influenza A and B in the Czech Republic from 2000-2001 to 2015-2016.
Martina Havlickova, Sophie Druelles, Helena Jirincova, Radomira Limberkova, Alexander Nagy

BMC Infect Dis· February 2019

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Microevolution and independent incursions as main forces shaping H5 Hemagglutinin diversity during a H5N8/H5N5 highly pathogenic avian influenza outbreak in Czech Republic in 2017.
Alexander Nagy, Ádám Dán, Lenka Černíková, Eliška Vitásková, Vlastimil Křivda

Arch Virol· August 2018

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Correction: MeltMan: Optimization, Evaluation, and Universal Application of a qPCR System Integrating the TaqMan qPCR and Melting Analysis into a Single Assay.
Alexander Nagy, Lenka Černíková, Eliška Vitásková, Vlastimil Křivda, Ádám Dán

PLoS One· April 2018

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Development and evaluation of TaqMan real-time PCR assay for detection of beak and feather disease virus.
Lenka Černíková, Eliška Vitásková, Alexander Nagy

J Virol Methods· June 2017

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Evaluation of TaqMan qPCR System Integrating Two Identically Labelled Hydrolysis Probes in Single Assay.
Alexander Nagy, Eliška Vitásková, Lenka Černíková, Vlastimil Křivda, Helena Jiřincová

Sci Rep· January 2017

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MeltMan: Optimization, Evaluation, and Universal Application of a qPCR System Integrating the TaqMan qPCR and Melting Analysis into a Single Assay.
Alexander Nagy, Lenka Černíková, Eliška Vitásková, Vlastimil Křivda, Ádám Dán

PLoS One· August 2016

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Large-scale nucleotide sequence alignment and sequence variability assessment to identify the evolutionarily highly conserved regions for universal screening PCR assay design: an example of influenza A virus.
Alexander Nagy, Tomáš Jiřinec, Lenka Černíková, Helena Jiřincová, Martina Havlíčková

Methods Mol Biol· December 2015

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Local-scale diversity and between-year "frozen evolution" of avian influenza A viruses in nature.
Alexander Nagy, Lenka Cerníková, Helena Jiřincová, Martina Havlíčková, Jitka Horníčková

PLoS One· November 2015

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Benign tailgut cyst masquerading as a hemorrhoid.
Joyce M Leo, Kate M O'Connor, Michael Pezim, Alexander Nagy, David F Schaeffer

Can J Gastroenterol Hepatol· April 2014

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[Phylogenetic analysis and genotyping of A/H3N2 Influenza viruses isolated from patients hospitalised with influenza-like illness symptoms in the na bulovce hospital in the season 2011/2012].
Alexander Nagy, Helena Jiřincová, Martina Havlíčková, Olga Džupová, Kristýna Herrmannová

Epidemiol Mikrobiol Imunol· April 2013

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Digital genotyping of avian influenza viruses of H7 subtype detected in central Europe in 2007-2011.
Alexander Nagy, Lenka Cerníková, Vlastimil Křivda, Jitka Horníčková

Virus Res· May 2012

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Development and evaluation of a one-step real-time RT-PCR assay for universal detection of influenza A viruses from avian and mammal species.
Alexander Nagy, Veronika Vostinakova, Zuzana Pirchanova, Lenka Cernikova, Zuzana Dirbakova

Arch Virol· May 2010

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