Publications by authors named "Alexandra Baumann"

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Editor's Note: Cell Surface Tetraspanin Tspan8 Contributes to Molecular Pathways of Exosome-Induced Endothelial Cell Activation.
Irina Nazarenko, Sanyukta Rana, Alexandra Baumann, Jessica McAlear, Andrea Hellwig

Cancer Res· August 2025

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TCGADownloadHelper: simplifying TCGA data extraction and preprocessing.
Alexandra Anke Baumann, Olaf Wolkenhauer, Markus Wolfien

Front Genet· May 2025

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North American Expert Consensus on the Post-procedural Care of Patients After Per-oral Endoscopic Myotomy Using a Delphi Process.
Dennis Yang, Abdul Mohammed, Rena Yadlapati, Andrew Y Wang, Thurarshen Jeyalingam, Alexandra J Baumann

Clin Gastroenterol Hepatol· April 2025

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Long-read genome and RNA sequencing resolve a pathogenic intronic germline LINE-1 insertion in APC.
Alexandra A Baumann, Lisanne I Knol, Marie Arlt, Tim Hutschenreiter, Anja Richter

NPJ Genom Med· April 2025

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Epigenomic Echoes-Decoding Genomic and Epigenetic Instability to Distinguish Lung Cancer Types and Predict Relapse.
Alexandra A Baumann, Zholdas Buribayev, Olaf Wolkenhauer, Amankeldi A Salybekov, Markus Wolfien

Epigenomes· February 2025

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A Current Perspective of Medical Informatics Developments for a Clinical Translation of (Non-coding)RNAs and Single-Cell Technologies.
Alexandra Baumann, Najia Ahmadi, Markus Wolfien

Methods Mol Biol· December 2024

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Limitations in next-generation sequencing-based genotyping of breast cancer polygenic risk score loci.
Alexandra Baumann, Christian Ruckert, Christoph Meier, Tim Hutschenreiter, Robert Remy

Eur J Hum Genet· August 2024

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Validation of Clinically Relevant Thresholds of Esophagogastric Junction Obstruction Using FLIP Panometry.
Dustin A Carlson, Jacqueline E Prescott, Alexandra J Baumann, Jacob M Schauer, Amanda Krause

Clin Gastroenterol Hepatol· June 2022

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A multi-stage machine learning model for diagnosis of esophageal manometry.
Wenjun Kou, Dustin A Carlson, Alexandra J Baumann, Erica N Donnan, Jacob M Schauer

Artif Intell Med· February 2022

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Validation of secondary peristalsis classification using FLIP panometry in 741 subjects undergoing manometry.
Dustin A Carlson, Alexandra J Baumann, Jacqueline E Prescott, Erica N Donnan, Rena Yadlapati

Neurogastroenterol Motil· January 2022

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Classifying Esophageal Motility by FLIP Panometry: A Study of 722 Subjects With Manometry.
Dustin A Carlson, C Prakash Gyawali, Abraham Khan, Rena Yadlapati, Joan Chen, Alexandra J Baumann

Am J Gastroenterol· December 2021

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Evaluating esophageal motility beyond primary peristalsis: Assessing esophagogastric junction opening mechanics and secondary peristalsis in patients with normal manometry.
Dustin A Carlson, Alexandra J Baumann, Erica N Donnan, Amanda Krause, Wenjun Kou

Neurogastroenterol Motil· October 2021

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Prediction of Esophageal Retention: A Study Comparing High-Resolution Manometry and Functional Luminal Imaging Probe Panometry.
Dustin A Carlson, Alexandra J Baumann, Jacqueline E Prescott, Jacob M Schauer, Amanda Krause

Am J Gastroenterol· October 2021

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Cells of the human respiratory tract support the replication of pathogenic Old World orthohantavirus Puumala.
Stefan Hägele, Christian Nusshag, Alexander Müller, Alexandra Baumann, Martin Zeier

Virol J· August 2021

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Esophagogastric Junction Opening Parameters Are Consistently Abnormal in Untreated Achalasia.
Katharine P Rooney, Alexandra J Baumann, Erica Donnan, Wenjun Kou, Joseph R Triggs

Clin Gastroenterol Hepatol· May 2021

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Achalasia subtypes can be identified with functional luminal imaging probe (FLIP) panometry using a supervised machine learning process.
Dustin A Carlson, Wenjun Kou, Katharine P Rooney, Alexandra J Baumann, Erica Donnan

Neurogastroenterol Motil· March 2021

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Multiple rapid swallows and rapid drink challenge in patients with esophagogastric junction outflow obstruction on high-resolution manometry.
Amanda J Krause, Hui Su, Joseph R Triggs, Claire Beveridge, Alexandra J Baumann

Neurogastroenterol Motil· March 2021

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Normal Functional Luminal Imaging Probe Panometry Findings Associate With Lack of Major Esophageal Motility Disorder on High-Resolution Manometry.
Alexandra J Baumann, Erica N Donnan, Joseph R Triggs, Wenjun Kou, Jacqueline Prescott

Clin Gastroenterol Hepatol· February 2021

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A deep-learning-based unsupervised model on esophageal manometry using variational autoencoder.
Wenjun Kou, Dustin A Carlson, Alexandra J Baumann, Erica Donnan, Yuan Luo

Artif Intell Med· February 2021

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Repetitive Antegrade Contractions: A novel response to sustained esophageal distension is modulated by cholinergic influence.
Dustin A Carlson, Wenjun Kou, Melina Masihi, Shashank Acharya, Alexandra J Baumann

Am J Physiol Gastrointest Liver Physiol· October 2020

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EsoFLIP for esophageal dilation: proposed advantages.
Alexandra J Baumann, Dustin A Carlson

Curr Opin Gastroenterol· July 2020

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The Hagfeldt Donor and Use of Next-Generation Bulky Donor Designs in Dye-Sensitized Solar Cells.
Alexandra Baumann, Christine Curiac, Jared H Delcamp

ChemSusChem· May 2020

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Robust, Scalable Synthesis of the Bulky Hagfeldt Donor for Dye-Sensitized Solar Cells.
Alexandra Baumann, Jonathon Watson, Jared H Delcamp

ChemSusChem· January 2020

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Analysis of the integrin β receptor for pathogenic orthohantaviruses in rodent host species.
Alexander Müller, Alexandra Baumann, Sandra Essbauer, Lukáš Radosa, Detlev H Krüger

Virus Res· July 2019

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Near-Infrared-Absorbing Indolizine-Porphyrin Push-Pull Dye for Dye-Sensitized Solar Cells.
Hammad Cheema, Alexandra Baumann, E Kirkbride Loya, Phillip Brogdon, Louis E McNamara

ACS Appl Mater Interfaces· May 2019

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