Publications by authors named "Alexandre Atkinson"

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Decipher RNA isoform combinations from minigene splicing assays and massive parallel sequencing with MAGIC.
Camille Aucouturier, Nicolas Goardon, Laurent Castéra, Alexandre Atkinson, Thibaut Lavolé

Bioinformatics· September 2025

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Fine mapping of RNA isoform diversity using an innovative targeted long-read RNA sequencing protocol with novel dedicated bioinformatics pipeline.
Camille Aucouturier, Nicolas Soirat, Laurent Castéra, Denis Bertrand, Alexandre Atkinson

BMC Genomics· September 2024

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Radiosensitizing Effect of PARP Inhibition on Chondrosarcoma and Chondrocyte Cells Is Dependent on Radiation LET.
Antoine Gilbert, Mihaela Tudor, Amandine Delaunay, Raphaël Leman, Julien Levilly, Alexandre Atkinson

Biomolecules· August 2024

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Validation of the Clinical Use of GIScar, an Academic-developed Genomic Instability Score Predicting Sensitivity to Maintenance Olaparib for Ovarian Cancer.
Raphaël Leman, Etienne Muller, Angelina Legros, Nicolas Goardon, Imène Chentli, Alexandre Atkinson

Clin Cancer Res· November 2023

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SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data.
Raphaël Leman, Valentin Harter, Alexandre Atkinson, Grégoire Davy, Antoine Rousselin

Bioinformatics· March 2020

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Genomic profile concordance between pancreatic cyst fluid and neoplastic tissue.
Arthur E Laquière, Arnaud Lagarde, Bertrand Napoléon, Raphaël Bourdariat, Alexandre Atkinson

World J Gastroenterol· September 2019

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Loss of Cajal bodies in motor neurons from patients with novel mutations in VRK1.
Lara El-Bazzal, Khalil Rihan, Nathalie Bernard-Marissal, Christel Castro, Eliane Chouery-Khoury, Alexandre Atkinson

Hum Mol Genet· July 2019

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A novel EXT2 mutation in a consanguineous family with severe developmental delay, microcephaly, seizures, feeding difficulties, and osteopenia extends the phenotypic spectrum of autosomal recessive EXT2-related syndrome (AREXT2).
Lara El-Bazzal, Alexandre Atkinson, Anne-Celine Gillart, Marc Obeid, Valérie Delague

Eur J Med Genet· April 2019

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Novel ALPK3 mutation in a Tunisian patient with pediatric cardiomyopathy and facio-thoraco-skeletal features.
Hager Jaouadi, Lilia Kraoua, Lilia Chaker, Alexandre Atkinson, Valérie Delague

J Hum Genet· October 2018

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Multitarget selection of catalytic antibodies with β-lactamase activity using phage display.
Melody A Shahsavarian, Nancy Chaaya, Narciso Costa, Didier Boquet, Alexandre Atkinson

FEBS J· February 2017

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Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players?
Cécile Militon, Alexandre Atkinson, Valérie Michotey, Céline Jeziorski, Cristiana Cravo-Laureau

Mar Genomics· October 2016

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Insights into a highly conserved network of hydrogen bonds in the agonist binding site of nicotinic acetylcholine receptors: a structural and theoretical study.
Alexandre Atkinson, Jérôme Graton, Jean-Yves Le Questel

Proteins· October 2014

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A genome scan for Plasmodium falciparum malaria identifies quantitative trait loci on chromosomes 5q31, 6p21.3, 17p12, and 19p13.
Audrey Brisebarre, Brice Kumulungui, Serge Sawadogo, Alexandre Atkinson, Séverine Garnier

Malar J· May 2014

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Malaria resistance genes are associated with the levels of IgG subclasses directed against Plasmodium falciparum blood-stage antigens in Burkina Faso.
Sarwat Afridi, Alexandre Atkinson, Séverine Garnier, Francis Fumoux, Pascal Rihet

Malar J· September 2012

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Genetic variations in genes involved in heparan sulphate biosynthesis are associated with Plasmodium falciparum parasitaemia: a familial study in Burkina Faso.
Alexandre Atkinson, Séverine Garnier, Sarwat Afridi, Francis Fumoux, Pascal Rihet

Malar J· April 2012

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Structural features and hydrogen-bond properties of galanthamine and codeine: an experimental and theoretical study.
Alexandre P Atkinson, Evelyne Baguet, Nicolas Galland, Jean-Yves Le Questel, Aurélien Planchat

Chemistry· October 2011

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Structural features and protonation site of epibatidine in the gas phase: an investigation through infrared multiphoton dissociation spectroscopy and computational chemistry.
Alexandre P Atkinson, Aurélien Planchat, Jérôme Graton, Eric Renault, Gilles Grégoire

Phys Chem Chem Phys· February 2011

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