Publications by authors named "Alexandre Coudray"

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Evolutionarily recent transcription factors partake in human cell cycle regulation.
Cyril Pulver, Romain Forey, Alex R Lederer, Martina Begnis, Olga Rosspopoff, Alexandre Coudray

Cell Genom· August 2025

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Statistical learning quantifies transposable element-mediated cis-regulation.
Cyril Pulver, Delphine Grun, Julien Duc, Shaoline Sheppard, Evarist Planet, Alexandre Coudray

Genome Biol· November 2023

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Genetic features and genomic targets of human KRAB-zinc finger proteins.
Jonas de Tribolet-Hardy, Christian W Thorball, Romain Forey, Evarist Planet, Julien Duc, Alexandre Coudray

Genome Res· August 2023

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Transposon-activated POU5F1B promotes colorectal cancer growth and metastasis.
Laia Simó-Riudalbas, Sandra Offner, Evarist Planet, Julien Duc, Laurence Abrami, Alexandre Coudray

Nat Commun· August 2022

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KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences.
Alexandra Iouranova, Delphine Grun, Tamara Rossy, Julien Duc, Alexandre Coudray

Mob DNA· January 2022

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Transposable elements and their KZFP controllers are drivers of transcriptional innovation in the developing human brain.
Christopher J Playfoot, Julien Duc, Shaoline Sheppard, Sagane Dind, Alexandre Coudray

Genome Res· September 2021

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Endogenous retroviruses drive KRAB zinc-finger protein family expression for tumor suppression.
Jumpei Ito, Izumi Kimura, Andrew Soper, Alexandre Coudray, Yoshio Koyanagi

Sci Adv· October 2020

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Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons.
Priscilla Turelli, Christopher Playfoot, Dephine Grun, Charlène Raclot, Julien Pontis, Alexandre Coudray

Sci Adv· August 2020

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DPPA2 and DPPA4 are necessary to establish a 2C-like state in mouse embryonic stem cells.
Alberto De Iaco, Alexandre Coudray, Julien Duc, Didier Trono

EMBO Rep· May 2019

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Hominoid-Specific Transposable Elements and KZFPs Facilitate Human Embryonic Genome Activation and Control Transcription in Naive Human ESCs.
Julien Pontis, Evarist Planet, Sandra Offner, Priscilla Turelli, Julien Duc, Alexandre Coudray

Cell Stem Cell· May 2019

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Detection and benchmarking of somatic mutations in cancer genomes using RNA-seq data.
Alexandre Coudray, Anna M Battenhouse, Philipp Bucher, Vishwanath R Iyer

PeerJ· July 2018

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