Publications by authors named "Alexey Savelyev"

Claim this Profile
A
A new UltraScan module for the characterization and quantification of analytical buoyant density equilibrium experiments to determine AAV capsid loading.
Alexey Savelyev, Emre H Brookes, Amy Henrickson, Borries Demeler

Eur Biophys J· July 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Multi-wavelength analytical ultracentrifugation of biopolymer mixtures and interactions.
Amy Henrickson, Gary E Gorbet, Alexey Savelyev, Minji Kim, Jason Hargreaves

Anal Biochem· September 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Assessment of the DNA partial specific volume and hydration layer properties from CHARMM Drude polarizable and additive MD simulations.
Alexey Savelyev

Phys Chem Chem Phys· May 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Moving analytical ultracentrifugation software to a good manufacturing practices (GMP) environment.
Alexey Savelyev, Gary E Gorbet, Amy Henrickson, Borries Demeler

PLoS Comput Biol· June 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Differential Deformability of the DNA Minor Groove and Altered BI/BII Backbone Conformational Equilibrium by the Monovalent Ions Li(+), Na(+), K(+), and Rb(+) via Water-Mediated Hydrogen Bonding.
Alexey Savelyev, Alexander D MacKerell

J Chem Theory Comput· September 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Competition among Li(+), Na(+), K(+), and Rb(+) monovalent ions for DNA in molecular dynamics simulations using the additive CHARMM36 and Drude polarizable force fields.
Alexey Savelyev, Alexander D MacKerell

J Phys Chem B· March 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Differential Impact of the Monovalent Ions Li⁺, Na⁺, K⁺, and Rb⁺ on DNA Conformational Properties.
Alexey Savelyev, Alexander D MacKerell

J Phys Chem Lett· January 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
All-atom polarizable force field for DNA based on the classical Drude oscillator model.
Alexey Savelyev, Alexander D MacKerell

J Comput Chem· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Balancing the interactions of ions, water, and DNA in the Drude polarizable force field.
Alexey Savelyev, Alexander D MacKerell

J Phys Chem B· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Induced Polarization Influences the Fundamental Forces in DNA Base Flipping.
Justin A Lemkul, Alexey Savelyev, Alexander D MacKerell

J Phys Chem Lett· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Do monovalent mobile ions affect DNA's flexibility at high salt content?
Alexey Savelyev

Phys Chem Chem Phys· February 2012

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Is DNA's rigidity dominated by electrostatic or nonelectrostatic interactions?
Alexey Savelyev, Christopher K Materese, Garegin A Papoian

J Am Chem Soc· December 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
Nonequilibrium water transport in a nonionic microemulsion system.
Maria Minakova, Alexey Savelyev, Garegin A Papoian

J Phys Chem B· May 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Chemically accurate coarse graining of double-stranded DNA.
Alexey Savelyev, Garegin A Papoian

Proc Natl Acad Sci U S A· November 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Counterion atmosphere and hydration patterns near a nucleosome core particle.
Christopher K Materese, Alexey Savelyev, Garegin A Papoian

J Am Chem Soc· October 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Molecular renormalization group coarse-graining of electrolyte solutions: application to aqueous NaCl and KCl.
Alexey Savelyev, Garegin A Papoian

J Phys Chem B· June 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Molecular renormalization group coarse-graining of polymer chains: application to double-stranded DNA.
Alexey Savelyev, Garegin A Papoian

Biophys J· May 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Polyionic charge density plays a key role in differential recognition of mobile ions by biopolymers.
Alexey Savelyev, Garegin A Papoian

J Phys Chem B· July 2008

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Inter-DNA electrostatics from explicit solvent molecular dynamics simulations.
Alexey Savelyev, Garegin A Papoian

J Am Chem Soc· May 2007

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Electrostatic, steric, and hydration interactions favor Na(+) condensation around DNA compared with K(+).
Alexey Savelyev, Garegin A Papoian

J Am Chem Soc· November 2006

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Supersymmetry theory of microphase separation in homopolymer-oligomer mixtures.
Alexander Olemskoi, Ivan Krakovsky, Alexey Savelyev

Phys Rev E Stat Nonlin Soft Matter Phys· February 2004

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis