Publications by authors named "Alina Remeeva"

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Structural characterization of Meiothermus ruber LOV domain.
Oleg Semenov, Vera Nazarenko, Anna Yudenko, Kirill Kovalev, Ivan Goncharov, Alina Remeeva

J Struct Biol· December 2025

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Structure and effective brightness of near-infrared fluorescent protein iRFP713/C15S/V254C complexed with phycocyanobilin.
Alina A Remeeva, Olesya V Stepanenko, Sergey A Silonov, Alexander S Kuzmin, Kirill V Kovalev

FEBS J· August 2025

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Engineering of soluble bacteriorhodopsin.
Andrey Nikolaev, Yaroslav Orlov, Fedor Tsybrov, Elizaveta Kuznetsova, Pavel Shishkin, Alina Remeeva

Chem Sci· June 2025

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Structural basis of signaling complex inhibition by IL-6 domain-swapped dimers.
Anna Yudenko, Sergey Bukhdruker, Pavel Shishkin, Sergey Rodin, Anastasia Burtseva, Alina Remeeva

Structure· January 2025

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luxA Gene From Enhygromyxa salina Encodes a Functional Homodimeric Luciferase.
Anna Yudenko, Sergey V Bazhenov, Vladimir A Aleksenko, Ivan M Goncharov, Oleg Semenov, Alina Remeeva

Proteins· December 2024

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Re-engineering of a carotenoid-binding protein based on NMR structure.
Andrey S Nikolaev, Daria A Lunegova, Roman I Raevskii, Pavel E Shishkin, Alina A Remeeva

Protein Sci· December 2024

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Reengineering of a flavin-binding fluorescent protein using ProteinMPNN.
Andrey Nikolaev, Alexander Kuzmin, Elena Markeeva, Elizaveta Kuznetsova, Yury L Ryzhykau, Alina Remeeva

Protein Sci· April 2024

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Two distinct mechanisms of flavoprotein spectral tuning revealed by low-temperature and time-dependent spectroscopy.
Andrey Nikolaev, Elena V Tropina, Kirill N Boldyrev, Eugene G Maksimov, Valentin Borshchevskiy, Alina Remeeva

Protein Sci· January 2024

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Fine spectral tuning of a flavin-binding fluorescent protein for multicolor imaging.
Andrey Nikolaev, Anna Yudenko, Anastasia Smolentseva, Andrey Bogorodskiy, Fedor Tsybrov, Alina Remeeva

J Biol Chem· March 2023

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Development and Characterization of Flavin-Binding Fluorescent Proteins, Part I: Basic Characterization.
Alina Remeeva, Anna Yudenko, Vera V Nazarenko, Oleg Semenov, Anastasia Smolentseva

Methods Mol Biol· September 2022

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Mechanisms of Formation, Structure, and Dynamics of Lipoprotein Discs Stabilized by Amphiphilic Copolymers: A Comprehensive Review.
Philipp S Orekhov, Marine E Bozdaganyan, Natalia Voskoboynikova, Armen Y Mulkidjanian, Maria G Karlova, Alina Remeeva

Nanomaterials (Basel)· January 2022

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Crystal structure of human 14-3-3ζ complexed with the noncanonical phosphopeptide from proapoptotic BAD.
Nikolai N Sluchanko, Kristina V Tugaeva, Ivan Gushchin, Alina Remeeva, Kirill Kovalev

Biochem Biophys Res Commun· December 2021

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Extreme dependence of Chloroflexus aggregans LOV domain thermo- and photostability on the bound flavin species.
Anastasia Smolentseva, Ivan M Goncharov, Anna Yudenko, Andrey Bogorodskiy, Oleg Semenov, Alina Remeeva

Photochem Photobiol Sci· December 2021

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The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
Katrin Röllen, Joachim Granzin, Alina Remeeva, Mehdi D Davari, Thomas Gensch

J Biol Chem· August 2021

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High-resolution structure of a naturally red-shifted LOV domain.
Ivan M Goncharov, Anastasia Smolentseva, Oleg Semenov, Ilia Natarov, Vera V Nazarenko, Alina Remeeva

Biochem Biophys Res Commun· August 2021

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Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Igor A Yaroshevich, Eugene G Maksimov, Nikolai N Sluchanko, Dmitry V Zlenko, Alexey V Stepanov, Alina Remeeva

Commun Biol· May 2021

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Nitrate- and Nitrite-Sensing Histidine Kinases: Function, Structure, and Natural Diversity.
Ivan Gushchin, Vladimir A Aleksenko, Philipp Orekhov, Ivan M Goncharov, Vera V Nazarenko, Alina Remeeva

Int J Mol Sci· May 2021

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NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Konstantin S Mineev, Sergey A Goncharuk, Marina V Goncharuk, Natalia V Povarova, Anatolii I Sokolov, Alina Remeeva

Chem Sci· April 2021

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Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Alina Remeeva, Vera V Nazarenko, Kirill Kovalev, Ivan M Goncharov, Anna Yudenko

Proteins· March 2021

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Rational Design of a Split Flavin-Based Fluorescent Reporter.
Anna Yudenko, Anastasia Smolentseva, Ivan Maslov, Oleg Semenov, Ivan M Goncharov, Alina Remeeva

ACS Synth Biol· January 2021

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Design, expression, purification and crystallization of human 14-3-3ζ protein chimera with phosphopeptide from proapoptotic protein BAD.
Kristina V Tugaeva, Alina Remeeva, Ivan Gushchin, Richard B Cooley, Nikolai N Sluchanko

Protein Expr Purif· November 2020

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A thermostable flavin-based fluorescent protein from Chloroflexus aggregans: a framework for ultra-high resolution structural studies.
Vera V Nazarenko, Alina Remeeva, Anna Yudenko, Kirill Kovalev, Anton Dubenko

Photochem Photobiol Sci· July 2019

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Different ligands of the TRPV3 cation channel cause distinct conformational changes as revealed by intrinsic tryptophan fluorescence quenching.
Bert Billen, Marijke Brams, Sarah Debaveye, Alina Remeeva, Yeranddy A Alpizar

J Biol Chem· May 2015

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X-ray structure of a CDP-alcohol phosphatidyltransferase membrane enzyme and insights into its catalytic mechanism.
Przemyslaw Nogly, Ivan Gushchin, Alina Remeeva, Ana M Esteves, Nuno Borges

Nat Commun· June 2014

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